Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00906 ATGGAGAGCAGCGAAGAGGAAGATGATTTCCCTTCCATCGAAAGCATAGTTCCCCAATCCATGGTCGATTCTCTCTACCAGTCCCGCTCTGAGAAGGGTATAAGAAAGCTTTGTTGCGAGCTGTTGAATTTAAAGGATGCTGTGGAGAACTTATGTGGAAATATGCAGACAAAGTACTTGGCTTTCTTGAGGATATCTGAAGAGGCTGTGGAAATGAAGCATGAGTTAGTTGAACTAAGAAAGCATATATCAGCTCAAGGGATAATTGTCCAAGATTTGATGACTGGTGTATGTCATGAATTAGAACTGTGGAACCAGTCTAATGGAAACACTCTTGAAAGTGAAGACCATAATGAACTTATGGAATTTCAAGATTCGTTGCCAAATGAATCAGATTTGTATAAGATAAAAATTTTGGAGCATATTGATGTTCTTTTGGCTGAGCACAAACTGGAAGAAGCTTTGGAGGCTTTAGATGCTGAAGAGATAAATTCTTCTGAAATAAAATTTTCAGGAGATTCTTCAACAGCTGAGTCCACTTCATACAGTTCTGCTTTTATGAAAAGAAAGGCAATGCTTGAGTGTGAGCTAGTGGAGATTGCTGAACAACCTTCTGTTGGTATTATTGAGCTGAAGAAGGCTTTATCTGGTTTACTTAGACTTGGAAAAGGTCCACGGGCACATCAGTTGCTACTACAATTTTATGGATCTCGTCTCCAGAAAAGCATTGAGTCATTCCTCCCTTCATGTGCTGTCTGTCCAAAGACATTTCCTGCAACATTATCTAAACTGGTATTTTCTATAATATCACTGTTGACAAAGGAATCTGCTCTAGTATTTGGTGACAATCCGATCTACACAAACAGAGTTGTTCAATGGGCTGAGTGGGAAATTGAATTCTTTGTGCGGTTGGTGAAAGAGAATGCGCCTTCATCTGAAACAGTTTCTGCTTTGCTGGCAGCTAGCATCTGTATACATGCTAGTCTCAATTACTGTTTGATATTGGAATCACAAGGATTGAAACTATCAAAATTACTCTTGGTGCTTTTGAGGCCTTTTGTGGAAGAAGTTCTTGAGTTGAACTTCAGACGTGCTAGAAGAGCAGTTCTTGAATTAATTGGATCAGATGAGAGCCTTCTGTTTTCACCTCGCTTTGCTTCTTCGCTGTCTCCTTTTTCAACGTCATCTGGGAGTCCGCTTGTTTATAGTGGAATGAAATTCATGTACATTGTTGATGATATATTAGAACAGCTAACACGCTCAGCCATTGTTCACTTTGGAGGGAATGTGCTTAGTAGGATTGCTCAGTTATTTGATAAATACATCGATGCTTTAATTAAGGCTCTACCCTGCCCCTCTGATGATGACAATCTTACTGAAATAAAAGAAATAATTGCCTTCAGAGCTGAAACAGATTCAGAACAACTAGCAATTTTGGGAATAGCATTTACCATTGTAGATGAGCTCTTACCTAGTGCTGTATTGAATGTATGGAAAAACCAGGATGTAAACAAGGAAATGAAAAATGGACCATTGGAAAATGTTGCATCGAATTTAGGAACTACTGCAGAGTTGAAGGATTGGAAACGACATCTTCAGCAATCGTTTGACAAGCTTAGAGATCATTTTTGTCGGCAATATGTTTTGAGTTTTATCTATTCAAGAGAAGGAAAAACCCGATTAGATGCCCGAATTTATTTAGATGGAAGGGGGGAGGATCTGTATTGGGATCCTGGTTCTTTGCCTTCACTTCCGTTTCAGGCACTATTTGCGAAGTTGCAGCAGTTGGCAACTGTAGCCGGAGAAGTTCTAGATGGAAAAGAGAAAATACAGAAAATTCTGCTTGCCAGATTAACAGAGACTGTTCTAATGTGGTTGTCAGATGAGCAGGAGTTTTGGGGTATTCTTGAAAGTGATTCAACTCATCTTCGAGCATGTGGGTTGCAGCAGTTAATACTTGACATGCACTTCACTGTTGAAATTGCACGTTTTGCGGGTTATCCATCTCGACACATTCATCAAATTGCATCTGGTATTATTGCTCGTGTTATTAGGACGTTCTCTGCTCAAGGCATTGATCCACAGAGTGCTCTCCCTGCCGATGAATGGTTTGTTGAAACTGCAAAGTCGGCAATAAACAAGCTTCTACTTGGAGCCGATGGATCAGATGTATCTGAGGCAGATGATGATCACATCATTATGAATGATGAGAATGCCTCTGATTTGGATGATTCTGCTTCCTCCCTTTCATCAGTAGAATCTACCGAGTCTTTTGCTTCTGCAAGTATGGGTGAACTTGATATCCCTGTATATTCCACGGACCACGAAAGCTAA 2334 40.06 MESSEEEDDFPSIESIVPQSMVDSLYQSRSEKGIRKLCCELLNLKDAVENLCGNMQTKYLAFLRISEEAVEMKHELVELRKHISAQGIIVQDLMTGVCHELELWNQSNGNTLESEDHNELMEFQDSLPNESDLYKIKILEHIDVLLAEHKLEEALEALDAEEINSSEIKFSGDSSTAESTSYSSAFMKRKAMLECELVEIAEQPSVGIIELKKALSGLLRLGKGPRAHQLLLQFYGSRLQKSIESFLPSCAVCPKTFPATLSKLVFSIISLLTKESALVFGDNPIYTNRVVQWAEWEIEFFVRLVKENAPSSETVSALLAASICIHASLNYCLILESQGLKLSKLLLVLLRPFVEEVLELNFRRARRAVLELIGSDESLLFSPRFASSLSPFSTSSGSPLVYSGMKFMYIVDDILEQLTRSAIVHFGGNVLSRIAQLFDKYIDALIKALPCPSDDDNLTEIKEIIAFRAETDSEQLAILGIAFTIVDELLPSAVLNVWKNQDVNKEMKNGPLENVASNLGTTAELKDWKRHLQQSFDKLRDHFCRQYVLSFIYSREGKTRLDARIYLDGRGEDLYWDPGSLPSLPFQALFAKLQQLATVAGEVLDGKEKIQKILLARLTETVLMWLSDEQEFWGILESDSTHLRACGLQQLILDMHFTVEIARFAGYPSRHIHQIASGIIARVIRTFSAQGIDPQSALPADEWFVETAKSAINKLLLGADGSDVSEADDDHIIMNDENASDLDDSASSLSSVESTESFASASMGELDIPVYSTDHES 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19138901 19144881 + BLOR00906 Blo01g00906 55346

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00906 777 PANTHER EXOCYST COMPLEX COMPONENT 8 1 777 IPR033961 GO:0000145|GO:0006887
Blo01g00906 777 SUPERFAMILY Cullin repeat-like 137 358 IPR016159 -
Blo01g00906 777 Coils Coil 144 164 - -
Blo01g00906 777 MobiDBLite consensus disorder prediction 738 760 - -
Blo01g00906 777 PANTHER EXOCYST COMPLEX COMPONENT EXO84C 1 777 - -
Blo01g00906 777 MobiDBLite consensus disorder prediction 740 760 - -
Blo01g00906 777 Pfam Exocyst component 84 C-terminal 139 342 IPR032403 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00906 K19986 EXOC8, SEC84; exocyst complex component 8 - mnt:21401434 1066.6
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00906 Blo-Chr1:19138901 Blo06g00768 Blo-Chr6:30982816 8.91E-115 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g151 Blo01g00906 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla01g00925 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00906 Blo_Chr01 FPKM 31.568306 30.142086 45.54697 39.161469 104.711235 108.442589 110.531364 48.898609 47.425976 49.301311