Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00907 ATGAGAGCGGAGAATTGGTTCTTGGAGATGGAGAAGAATTTCGAGACACTTCAAAATTTCGGAAGAGTTATAGGTGGGGATTACGACTTATTACCAAGAGATGTTGGCATCCAGTTGGTGGAACGCCGCTTGGACGATTTTGGCGAGTGTGATACGATTCATGAGGAGACAGTTGCTCAGGTTGGCAAGAAAAATCGTCATCGAGCGACGAATGGCAACGACAAGGGGATGGCTACGTACGATCGATCAGCAAGAGTTGCAGGGACAGTTAGAGGAGATAGGGAGGTTTCAGCTCATGAAGGAGTCGGCCGGCTGGAGGTTTTGGTTCAGTCTGAATATGATGCGTGTTCATGCGATGCATTACAGAAAATAGGCGTATCTCTTCTGGAAGCCAAGAGTGAGATACACCCAAGGTCATGTGGCCTAACCATTCACTCCGACAAGGAGGTATATCCATCGGGGGTGTTCCACTTGCCGGTACCACACTCCTTGTTAAAAGCGTTGGGGATTTCAGAACGGGAGAAGAGTGAGCCCAGATTCCATGTAGCACTCACACCTCAGCACTCCCTATATGGGAATATTGATGATATTGAATCTGTTATACCACTACGGATTGGAAATTTCATTCATGCTGCTATTATTGAGCCTTATTTATATATTGGAATTTCAAATGAGGTTGTTAACCTTAGCATGCTTAGTGGTATAACTATAGAAACGCTGCTGACTAAAGAACACAATGGTACTGAGCTTGATATCCAGTCTAAGATGAAAGTCATTATGTTTGGTGTCAATCATAATTTCCCATTTGATCCAGGAGGAGGAACATCGGTTGAAGATAGAGGTGGAAGACTGGATTTGAGCCTAGCTTCTCCAAAGTTAGACCTAAATTACGACGAGGTGGGCAATAAGTACGATTATAAACCCACGGAACTAAACATTACTTGGGGCAAGGACAAACGCTATTGGAAGATTAACGCCGAAGCTGCAGAGCTATTGCAAGTGTCTTGGCTTGAAGTAACGGGCACATTAACTGGAGAATTGAAGCCTGGAAAGAAGTATAAGATTACATTTAAAATCTCAATGGAATCTCTTGCATTTGGATGGGAGGGAATCCCAATTTATGTGATGGCTAAGGTTGGTAAAAAAGGAAAATACACTCGCGAAATCTTCTATCCCGTAAGTGGAAAATCAGCCAACATTTCTCTCACAGTCACGGTGCCTTCGGATACTAAGGACCTGACGCTCTATTTTGGGCTCTATGAAGTTTTCAGTGGGGTTTGGAAGGGAGGTTTAAAGATTCATAGAGCAACTGTTGAGGAAACTCAAGACGAGAACTAG 1338 43.72 MRAENWFLEMEKNFETLQNFGRVIGGDYDLLPRDVGIQLVERRLDDFGECDTIHEETVAQVGKKNRHRATNGNDKGMATYDRSARVAGTVRGDREVSAHEGVGRLEVLVQSEYDACSCDALQKIGVSLLEAKSEIHPRSCGLTIHSDKEVYPSGVFHLPVPHSLLKALGISEREKSEPRFHVALTPQHSLYGNIDDIESVIPLRIGNFIHAAIIEPYLYIGISNEVVNLSMLSGITIETLLTKEHNGTELDIQSKMKVIMFGVNHNFPFDPGGGTSVEDRGGRLDLSLASPKLDLNYDEVGNKYDYKPTELNITWGKDKRYWKINAEAAELLQVSWLEVTGTLTGELKPGKKYKITFKISMESLAFGWEGIPIYVMAKVGKKGKYTREIFYPVSGKSANISLTVTVPSDTKDLTLYFGLYEVFSGVWKGGLKIHRATVEETQDEN 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19182425 19199849 + BLOR00907 Blo01g00907 55347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00907 445 Gene3D - 302 443 - -
Blo01g00907 445 Pfam Phloem protein 2 307 438 IPR025886 -
Blo01g00907 445 PANTHER - 299 438 - -
Blo01g00907 445 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A9 299 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00907 Blo-Chr1:19182425 Blo03g00037 Blo-Chr3:1628856 1.20E-27 dispersed
Blo01g00907 Blo-Chr1:19182425 Blo05g00568 Blo-Chr5:13087470 1.20E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00907 - - tcc:18596416 147.902