Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00908 ATGAAAACCGTAGTACATAACCCTCAGAACATCGCCGTTGAGCTCTACTCTAACATTGCTTCCACTTTCAGCAAAGTCGAGGACTTCGTGGTTGATGGTCAACTCGCCGAAGCATCGGTTGAGGGATGTCTGCTAGGTGAAATGCAAGGAACACAAACAGCTGGAGTATTTGGATTCAACACTTACCGTTCGGGTCCTAAGGCGAAATGTTTGGCCAACCAAAGAGGCTACTTGTTTTTGTTAACCTGTTTGGTGGGAAAAAAAACTGGTTCTAAGATTTTTGTTAATCAGGTCAAGCCTCTTCTGGAGGATGTTGAAATTCATTTAACATTGTATGAGACTAAGTATCAGTTGCACGCAAAGGACGTTTGCTCGTATAGTATGGCTCGTTCTGCAGTGGATGAAATGTCTGACTCTGGTGCTTTTGTGAGAACTGCTTCAACATTCCGTAATTTTGTGTCGAGAGATCCAAATTCTCAATTTCCTGCTGAATCTGGAAGATATCATTTATACGCATCTTATGCTTGTCCATGGGCTTCAAGGTGTCTTACATATTTGAAGATAAAAGGACTTGACAAAGCCATTAGCTTTTCGTCAGTCAAACCCATATGGCAAAGAACAAAAGAAACAGACGAGCATATGGGCTGGGTGTTTCCTGCAACTGATAATGAAGAGCCAGGTGCTGAACCAGACCTTTTGAATGGGGCGAAAAGTATAAGAGATCTCTATGAACTTGCGAGTTCAAACTACGCGGGAAAGTACACCGTTCCTGTTCTGTGGGACCAGAAACTCAAAACGATTGTTAATAATGAGAGTTCAGAGATAATTCGCATGTTTAATACTGAGTTCAATGATATAGCAGAGAATTCAGCCTTAGACCTGTATCCTCCTCACTTGCAAGGCCAAATTGATGAGGCCAATCAATGGGTGTATACTGGAATAAATAATGGTGTCTATAAGTGTGGTTTTGCTAGGAAGCAAGAACCATATAACGAGGCTGTGGAACAGTTGTACGAAGCTTTAGAAAAATGCGAGCATATACTTAGCAAACAACGGTATTTATGCGGGGATACTCTAACCGAAGCCGATATTCGACTCTTTGTCACTCTCATAAGGTTTGATGAGGTATATGTGGTTCACTTCAAATGCAACAAGAAACTTATCCGAGAGTATCCAAATCTGTTCAACTACACCAAAGATATCTTCCAAGTTCCCGGTGTTAGTAGCTCAGTGAACATGGAGCACATCAAGAAGCATTATTACGGAAGCCATCCTTCGATAAATCCCTTTGGCATCATCCCTGTTGGCTCGAATACCGACTATTCGTGTCCTCACGGTCGGGACAAGTTTTCTGCCTAA 1359 42.09 MKTVVHNPQNIAVELYSNIASTFSKVEDFVVDGQLAEASVEGCLLGEMQGTQTAGVFGFNTYRSGPKAKCLANQRGYLFLLTCLVGKKTGSKIFVNQVKPLLEDVEIHLTLYETKYQLHAKDVCSYSMARSAVDEMSDSGAFVRTASTFRNFVSRDPNSQFPAESGRYHLYASYACPWASRCLTYLKIKGLDKAISFSSVKPIWQRTKETDEHMGWVFPATDNEEPGAEPDLLNGAKSIRDLYELASSNYAGKYTVPVLWDQKLKTIVNNESSEIIRMFNTEFNDIAENSALDLYPPHLQGQIDEANQWVYTGINNGVYKCGFARKQEPYNEAVEQLYEALEKCEHILSKQRYLCGDTLTEADIRLFVTLIRFDEVYVVHFKCNKKLIREYPNLFNYTKDIFQVPGVSSSVNMEHIKKHYYGSHPSINPFGIIPVGSNTDYSCPHGRDKFSA 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19572078 19577598 - BLOR00908 Blo01g00908 55348

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00908 452 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 420 IPR010987 -
Blo01g00908 452 PANTHER - 109 451 - -
Blo01g00908 452 CDD GST_C_Omega_like 296 436 - -
Blo01g00908 452 SUPERFAMILY Thioredoxin-like 150 285 IPR036249 -
Blo01g00908 452 SFLD Glutathione Transferase (cytosolic) 131 450 IPR040079 -
Blo01g00908 452 Pfam Glutathione S-transferase, N-terminal domain 175 282 IPR004045 -
Blo01g00908 452 PANTHER GLUTATHIONYL-HYDROQUINONE REDUCTASE 109 451 IPR016639 GO:0004364
Blo01g00908 452 SFLD Xi.1 131 450 IPR016639 GO:0004364
Blo01g00908 452 Gene3D - 303 452 - -
Blo01g00908 452 Gene3D Glutaredoxin 123 302 - -
Blo01g00908 452 SUPERFAMILY GST C-terminal domain-like 291 426 IPR036282 -
Blo01g00908 452 Pfam Glutathione S-transferase, C-terminal domain 330 397 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00908 K07393 ECM4, yqjG; glutathionyl-hydroquinone reductase [EC:1.8.5.7] - rcu:8274796 588.186
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00908 Blo-Chr1:19572078 Blo10g00633 Blo-Chr10:19536681 1.79E-75 dispersed
Blo01g00908 Blo-Chr1:19572078 Blo14g00364 Blo-Chr14:3958679 3.91E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g166 Blo01g00908 . . . . . . . . . . Cma18g00559 . . . Cpe09g00681 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007165 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 3 2 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00908 Blo_Chr01 FPKM 0.814286 0.512599 0.585805 0.0 0.647196 0.906707 0.0 0.0 0.0 0.0