Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00914 ATGTCCACCATTAGAGCTTATGGGAAGGTCAGTGAAGCCGAACAATTGATGCTAGACTCTCGCCGTAGAACCAGAAAGAGAATTGCTATTATCGTTCTATCCTCCATTGTTCTCGTGGGAGTTGTTCTTGCAGCTGTCTTGGGAACTGCAAGCTCCAGAAATGGAGGAAAATCCAGAAATAATATGCCTATCTCTACCTCCATCAAAGCAGTTTGCGATGTAACTTTGTACCCAGATAGTTGTTACGGCGCTCTCAATCCTTTGAAAAACTCAACTCAGCTTAGACCGGAGGAGATTTCTAAGATGATAATTCAGGGCACCATTGATGAGATATCAAAAGCTTCAGACTACATTTTTCATAGCGCTATAAAAAATTCTACCGATAAAATGACAGTTCAAGCTTTGGAAAACTGCGAGGAGCTTCTGGGTTTAGCTCTAGACCACTTGAATAATTCTCTCTCATCTTCTAATGCATCTCTAACTGACGCCTTTGATGACATACGAACATGGCTGAGCTCCGCAACTACATATCAACAAACCTGCATAGATGGGTTTGAAGACATTGATGGAGCTTTGAAAAACTCCATTTCCGGGTATTTGAAAAACTCAACTGAATATTCAAGCAACAGCCTCGCCATTATCACGTGGCTATCGAGTTTCACCGGGTCTCTGAAACTCCGACGACTCATGGAGGCACCAGAGTGGGTGAGCTCGGCTACTCGGCGGCTGTTGCAGAGTGATTTGAGAAAGCAGGCGGACATTGTGGTGGCGAAAGATGGGTCAGGGAAGTTTAAGACTATAAAGGCGGCGCTGAAGGCGGTGCCGAAAAATAGTCATAAGAGGACAGTGATTTACGTGAAGAGGGGAATTTATTACGAGAACGTGGAAGTGGAGAAGACGATGTGGAATGTGGTGATGATCGGAGATGGAATGACTTCCACTATCGTTTCTGCAAGTCTTAACTTCGTTGATGGAACTCCTACTTTCTCAAGTGCAACTTTTGCTGCAAAGGGGCAAAACTTTATTGCAATCGACATGGGTTTCCGCAACACCGCCGGACCAAGCAAGCACCAAGCCGTCGCTCTAATGTCCACCTCCGATCAATCCGTCTTCTACCGCTGCAACATCAACGCCTACCAAGATACTCTCTACGCCCACTCCAACCGCCAATTTTACCGCGACTGTAACGTCTACGGCACCGTCGATTTCATTTTTGGAAACTCGGCCGTCGTCCTCCAAAACACCTTCATCTTCCCCCGATTGCCGAACCCAGGTCAGCAAAACACAATCACAGCTCAGGGAAAGTTTGACCCTCATCAAAACACAGGTATTTCGATTCAGAACTGCTCGGTTATGCCGTTCGGAAACCTGGGTTCTACACAAACGTACCTCGGCCGGCCGTGGAAGAACTACTCGACGGCTGTCTATATGCAGAGCAACTTGGGGGGTTCGATCCACCCCGACGGTTGGTTACCGTGGGTGGGCGATTCAGCTCCAAGCACCATTTTTTACGCTGAGTATCAGAATTATGGATCTGGTTCTTCGACTTCGAAGAGAGTGAAGTGGAAAGGAGTGAGACGTATTAATGGAGCTCAGGCGAGTAAGTTTACAGTTTCTGAATTTCTTTCCGTGGGTAAGTGGATCTCGGCGGCCGGAGTTCCGTTCAAAGCCGGTCTGTAA 1680 47.02 MSTIRAYGKVSEAEQLMLDSRRRTRKRIAIIVLSSIVLVGVVLAAVLGTASSRNGGKSRNNMPISTSIKAVCDVTLYPDSCYGALNPLKNSTQLRPEEISKMIIQGTIDEISKASDYIFHSAIKNSTDKMTVQALENCEELLGLALDHLNNSLSSSNASLTDAFDDIRTWLSSATTYQQTCIDGFEDIDGALKNSISGYLKNSTEYSSNSLAIITWLSSFTGSLKLRRLMEAPEWVSSATRRLLQSDLRKQADIVVAKDGSGKFKTIKAALKAVPKNSHKRTVIYVKRGIYYENVEVEKTMWNVVMIGDGMTSTIVSASLNFVDGTPTFSSATFAAKGQNFIAIDMGFRNTAGPSKHQAVALMSTSDQSVFYRCNINAYQDTLYAHSNRQFYRDCNVYGTVDFIFGNSAVVLQNTFIFPRLPNPGQQNTITAQGKFDPHQNTGISIQNCSVMPFGNLGSTQTYLGRPWKNYSTAVYMQSNLGGSIHPDGWLPWVGDSAPSTIFYAEYQNYGSGSSTSKRVKWKGVRRINGAQASKFTVSEFLSVGKWISAAGVPFKAGL 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20071965 20073734 - BLOR00914 Blo01g00914 55354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00914 559 Pfam Pectinesterase 253 543 IPR000070 GO:0030599|GO:0042545
Blo01g00914 559 PANTHER PECTINESTERASE 5 557 - -
Blo01g00914 559 SMART PMEI_2 63 213 IPR006501 GO:0004857
Blo01g00914 559 SUPERFAMILY Pectin lyase-like 251 558 IPR011050 -
Blo01g00914 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 218 IPR035513 -
Blo01g00914 559 Pfam Plant invertase/pectin methylesterase inhibitor 67 213 IPR006501 GO:0004857
Blo01g00914 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 219 IPR035513 -
Blo01g00914 559 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Blo01g00914 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 217 IPR006501 GO:0004857
Blo01g00914 559 PANTHER PECTINESTERASE 5 557 - -
Blo01g00914 559 CDD PMEI-like_3 70 219 - -
Blo01g00914 559 Gene3D - 248 559 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00914 Blo-Chr1:20071965 Blo11g00207 Blo-Chr11:1679936 0 dispersed
Blo01g00914 Blo-Chr1:20071965 Blo11g00206 Blo-Chr11:1660987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00914 - - mcha:111010791 716.842