Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00941 ATGAATAATGTTGAACAAACCACGTTATTTTCGACTGATCTTCTCCCATCCCTTGGAGCCAGAATCAATCAGACCACTGAACTCCGAAAGTTCATAATTTCACCGCTTAGTTCCCGTTACAGGGCCTGGCAGATTTTTCTAGTTGTTCTTGTCTTTTACTCAGCTTGGATTTCTCCATTTGAGTTTGCATTTCTGCCATACAAGCAAACTGATTTGCTCATCTTTGACAACGTCGTCAATGGCTTCTTTGCCATCGATATCATACTGACTTTCTTCGTTGCATATCTGGATAGAAATTTTTATCTTCTCGTTGATGATCCCCAAAAAATAGCAATCAGGTACATATCAACTTGGTTCATTTTCGATATCTGCTCCACAGTACCATTTCAATCTATCACCCTCTTGTTTACGAGCCATACAAGGGATCTCGAGTTTAAAATCCTGAACATGCTCAGACTCTGGCGGGTCAGACGAGTCAGCGCCCTCTTTGCAAGACTTGAGAAGGACATCAGATTCAATTACTTCTTGGTCAGATGCACAAAGCTCATTAGCGTCACCCTTTTTGCAGTTCATTGTGGTGGATGCTTTATGTATTTGATTGCAGATAAATATCCTGACCCTAAGAAGACATGGATTGGTGCAGCAAATCCTAAGTTCAAAGAAGATAGCCTCTGGAACAGATACGTGACTGCAATTTATTGGTCAATAACAACACTAACTACAACTGGCTATGGCGACTTACATCCCAAGAATCCAAGAGAGATGATTTTTGCTGTCTTCTACATGCTCTTCAACTTGGGCTTGACATCTTATCTCATTGGAAACATGACAAATCTCGTTGTACGCTGCACGAGCCACACCCAAAATTTTCGGGATTCAATCCGAACAGCTTCTGAATTTGCATCAAGAAATCAGTTGCCTCCTAGGATTCAAGACCAAATGATGTCACATATATGTCTCAAGTTCAAAGCAGAGGGATTGAAGCGACTGGATGCTTTAGACACAATGCCTAAAGCAATTCGAGCAAGCATTGCTGAATATCTCTTCTTTCCTGTGGTTCAAAAAACCTATCTCTTTGAAGGCGTTTCCCACGATTTCCTTCTCCAACTAGTCCCTGAAATAGAAGCTGAGTATTTCCCTCCAAAAGAAGATATAATTCTACAGAATGAGGCTCCAACTGATCTCTATATACTTGTATCGGGCAGTGCAGTGAGTGACATTTTCTGTCTCCAAATCACAGTACCTTCAGTAATTGGACAGGCAAGTTCAGGTGATGTGTTTGGAGAGACAGGAGTACTGTATAATAAACCTCAGCCATTATCAGTTCGGACAACGGAGCTTTCTCAAATTCTACGACTCAAGAATACTTCGCTGATGCAAACAATACAATCAAATCTGGAAGACGCACAAATCATTGCAAACAATCTTTTGGTGAAACTAAAAGAGATAGAAACTTTCAGTTCAAAACCGAATCTCCAAGAATCGATCAAAGATTGCCATTATGAAGAAAACGTGTGTTTTCTAGAATCAATGGCAGAAGAAATGAGTTGTGCAAGCGAAAGTTCATTGCACCCTAATTCTACGAAATACCCTCTTCATGATCGGGTTCGAGAAAGGCAGATGGAAAAGGAGAACATTCTATTGGAAGAAAGAGCACAAGTCAACATTCTCAACCGCCATGCGAGGACCTCTAAAGAAGTGGTGGAAAATCAACGAAAGAGTAGCATGTACGATCTCTTCAAAACATACCAAAATAGAACCGGACCAGATGAGCATAGAATCAAGATTCTCGATGAAGAAAGTGAAAATTATACAAGCAGCCATGAAATTGTACCTAAGCGCTCAACACTAACGATTTCCAGCCGCCATGGCGTCAAAGAGAGAACAAAAATGGCGGAAAAGAGAGTGACCATCCACCTTCAGGCTAAAACTAACAGCGGAACAAAAATGCTGGATGGAAGGTTAATACAATTACCTGAATCAATGGAAGAGCTGCGCAGAATCGCAGGCGAGAAGTTCGAATGCAACGAGCTGCCGCTAGTCCTGAATGCGGAGAATGCGGAGATAGACGACATTAGCGTGATTAGAGATGGCGATCTTTTGTTTCTCTCAGAAAAATTGAAGCAACTCCAAAACTAG 2139 41.28 MNNVEQTTLFSTDLLPSLGARINQTTELRKFIISPLSSRYRAWQIFLVVLVFYSAWISPFEFAFLPYKQTDLLIFDNVVNGFFAIDIILTFFVAYLDRNFYLLVDDPQKIAIRYISTWFIFDICSTVPFQSITLLFTSHTRDLEFKILNMLRLWRVRRVSALFARLEKDIRFNYFLVRCTKLISVTLFAVHCGGCFMYLIADKYPDPKKTWIGAANPKFKEDSLWNRYVTAIYWSITTLTTTGYGDLHPKNPREMIFAVFYMLFNLGLTSYLIGNMTNLVVRCTSHTQNFRDSIRTASEFASRNQLPPRIQDQMMSHICLKFKAEGLKRLDALDTMPKAIRASIAEYLFFPVVQKTYLFEGVSHDFLLQLVPEIEAEYFPPKEDIILQNEAPTDLYILVSGSAVSDIFCLQITVPSVIGQASSGDVFGETGVLYNKPQPLSVRTTELSQILRLKNTSLMQTIQSNLEDAQIIANNLLVKLKEIETFSSKPNLQESIKDCHYEENVCFLESMAEEMSCASESSLHPNSTKYPLHDRVRERQMEKENILLEERAQVNILNRHARTSKEVVENQRKSSMYDLFKTYQNRTGPDEHRIKILDEESENYTSSHEIVPKRSTLTISSRHGVKERTKMAEKRVTIHLQAKTNSGTKMLDGRLIQLPESMEELRRIAGEKFECNELPLVLNAENAEIDDISVIRDGDLLFLSEKLKQLQN 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22824649 22827711 - BLOR00941 Blo01g00941 55381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 272 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 228 245 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 87 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 53 60 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 254 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PRINTS EAG/ELK/ERG potassium channel family signature 76 86 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g00941 712 PANTHER POTASSIUM CHANNEL AKT1 4 703 IPR045319 GO:0005249|GO:0006813
Blo01g00941 712 SMART cnmp_10 358 477 IPR000595 -
Blo01g00941 712 Coils Coil 700 712 - -
Blo01g00941 712 CDD CAP_ED 358 473 IPR000595 -
Blo01g00941 712 Gene3D Jelly Rolls 328 497 IPR014710 -
Blo01g00941 712 PANTHER POTASSIUM CHANNEL KAT1 4 703 - -
Blo01g00941 712 ProSiteProfiles cAMP/cGMP binding motif profile. 358 479 IPR000595 -
Blo01g00941 712 Pfam Cyclic nucleotide-binding domain 378 465 IPR000595 -
Blo01g00941 712 SUPERFAMILY Voltage-gated potassium channels 35 282 - -
Blo01g00941 712 Gene3D - 41 282 - -
Blo01g00941 712 Pfam KHA, dimerisation domain of potassium ion channel 634 703 IPR021789 -
Blo01g00941 712 ProSiteProfiles KHA domain profile. 635 712 IPR021789 -
Blo01g00941 712 SUPERFAMILY cAMP-binding domain-like 285 476 IPR018490 -
Blo01g00941 712 Pfam Ion transport protein 41 287 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00941 Blo-Chr1:22824649 Blo08g00267 Blo-Chr8:3401762 0 dispersed
Blo01g00941 Blo-Chr1:22824649 Blo14g00462 Blo-Chr14:5703453 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00941 K21867 - pop:7463003 813.142