Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01024 ATGTCAAAGTGTTGGAGGAACATATCTTTAGCTTGTGATCCTTCTTATGCCTCGACAATAGGGTCTTCATGGTTAGCCTCAGGTGTACTTGCAAACCGAGTGTGTGCAAGGGCACACCAAGGTCAAAAGCTGACATTGGTTGAGTATCTGCTTCTGCTATACCGTGCCTTATTGCCCACTCCTGTATGGTATCGTTTCTTCTTGAACAAAGATTATGGAAGTCTGTTTTCATCACTGATGACGGGATTGTATTTGACTTTCAAGCTCACGTCCATCGTTGAAAAGCTGCAATCTTTCTTTGCGGCGGCAAAGGCATTATCACGAAAAGACGTGCATTATGGGGCCCATGCAACATCAGAGCAGGTCAATGCAGCAGGTGATCTGTGTGCTATTTGCCAGGAGAAGATGCATACTCCTGTCCTACTTTGTTGCAAGCACATCTTCTGCGAGGACTGTGTATCAGAATGGTATGCCTACTACTGCCTTCCCTTGAGAATTTGGGAGGACATTAACAGCTTATATGAATTTATTTGCTACCCTTCTCCATCTTCTATGAAGGGGGTTGCGGAGGGAAAGAAGAAGAATGAGCCACCCTTCCCTCTTCGACAATGTAAAGAAAGGAAAGTGTTGGTAGAAAAACGTGGTTTAAACAGGCGAGTCAGGCGTTTTGGTTATCTTCTGTTGGAACTAATTGTGGAAGCTTGTAGCAGTTCATCTTCTAATGCGACATCAATGACTTCTTCTGAGTGGGACACAAAATAA 762 44.09 MSKCWRNISLACDPSYASTIGSSWLASGVLANRVCARAHQGQKLTLVEYLLLLYRALLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFKLTSIVEKLQSFFAAAKALSRKDVHYGAHATSEQVNAAGDLCAICQEKMHTPVLLCCKHIFCEDCVSEWYAYYCLPLRIWEDINSLYEFICYPSPSSMKGVAEGKKKNEPPFPLRQCKERKVLVEKRGLNRRVRRFGYLLLELIVEACSSSSSNATSMTSSEWDTK 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31514091 31516473 + BLOR01024 Blo01g01024 55464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01024 253 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 38 158 IPR044235 GO:0061630|GO:1904294
Blo01g01024 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 194 IPR013083 -
Blo01g01024 253 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 38 158 - -
Blo01g01024 253 ProSitePatterns Zinc finger RING-type signature. 144 153 IPR017907 -
Blo01g01024 253 SUPERFAMILY RING/U-box 121 159 - -
Blo01g01024 253 ProSiteProfiles Zinc finger RING-type profile. 129 161 IPR001841 -
Blo01g01024 253 Pfam RING-type zinc-finger 129 156 IPR027370 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01024 Blo-Chr1:31514091 Blo11g00717 Blo-Chr11:8678907 5.67E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01024 - K22379 mnt:21405586 210.305