Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01049 ATGGCGCCTTCTCAAAGAGAACCATGCCTCTTAGAAAATGGCAATGCTAAGGGTTTGAACAGAGAGATGAGACCGTACGGACGCACAGCCCATAACATGTCCTCCTCCTCTCTGCGGAAAAAGTCAGACTTGACCCTTGTTTCTAAAGTGAAGTTTGGTTGTCTCAGAAAGCTTCTGATTAATCTCCAGGAAGTTATTTTGGGGACCAAACTTTCTGTTCTTTTCCCAGCTATCCCTCTCGCCATTGCTGCTGAGTTTTATGGCTTTGGAAGACCATGGATTTTCGGGCTGAGCTTACTTGGACTTACACCACTTGCAGAACGTGTTAGCTTTCTGACGGAACAAATTGCTTATTACACTGGCCCTACAGTGGGAGGACTATTGAATGCAACGTGTGGAAATGCTACAGAGCTTATTATTGCAGTGTTGGCGCTTTCCAAAAGTAAAATAGAAGTGGTGAAGTATTCTCTTCTGGGTTCCGTTCTCTCAAATCTTCTCCTTGTCCTTGGGACCTCTCTCTTTTGTGGTGGTCTTGCAAATCTTAAGAAAGAACAAAAATTTGACAGACGGCAAGGTGATGTGAACTCACTGATGCTTCTGTTATCCCTACTGTGTCACTTGCTGCCGTTGCTCTTCACTCTTGCTGGAGCCTCAGCTGCTGTAACAACATTTCCAACTCTCGCATTGTCGAGAGCGAGCAGCATAATAATGCTTGTTGCCTACGTTGCTTACATAGTTTTCCAATTATGGACTCATCGCCAGCTATTTGAAGCACAGGACTCAGAAGACGATGATCAAGTAGGGGAAGCGGCCCCGGTTATTGTATTTTGGAGCGGTTTTGCATGGCTGGTCGGAATGACCCTAGTTATTGCTTTGTTGTCTGAATACGTAGTGGCTACAATTGAGGATGCATCAGATTCGTGGGGTTTATCAGTTAGCTTCCTCAGCATAATTTTACTACCAATTGTTGGAAATGCAGCCGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGATATATCATTGGGTGTTGCTCTAGGATCTGCCACTCAAATTGCTCTATTTGTGATTCCACTGTGTGTGATTATTGGTTGGATAATGGGAATCAACATGGACCTTAATTTGAACCTCCTTGAAACTGGCTCTCTTGGCTTATCAATAGTTGCTACAGCATTCACTTTACAGGACGGCACTTCCCATTACATCAAAGGGCTAGTTCTTCTTCTCTGCTACATTGCCATATCAGCTTGTTTCTTTGTATCTTACACACCTTTCAAGTCCTCCCCTTCTGGCGTATCCCGCCTTCAGGGTTTCTTCCCTCCCGACGTATCCCGCCAGAAGGGTTTCTTCAGTGATGGGCGTATCCCGCTCATCCTGAATATTCTTGTTCTTAGCATTTTTCTCACTCGTGCATGTGGGTATCACCCCGAAGGGGTACCCCCTACTGGGTTTCTATTAACATGA 1473 44.87 MAPSQREPCLLENGNAKGLNREMRPYGRTAHNMSSSSLRKKSDLTLVSKVKFGCLRKLLINLQEVILGTKLSVLFPAIPLAIAAEFYGFGRPWIFGLSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATELIIAVLALSKSKIEVVKYSLLGSVLSNLLLVLGTSLFCGGLANLKKEQKFDRRQGDVNSLMLLLSLLCHLLPLLFTLAGASAAVTTFPTLALSRASSIIMLVAYVAYIVFQLWTHRQLFEAQDSEDDDQVGEAAPVIVFWSGFAWLVGMTLVIALLSEYVVATIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIIGWIMGINMDLNLNLLETGSLGLSIVATAFTLQDGTSHYIKGLVLLLCYIAISACFFVSYTPFKSSPSGVSRLQGFFPPDVSRQKGFFSDGRIPLILNILVLSIFLTRACGYHPEGVPPTGFLLT 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34017284 34021235 + BLOR01049 Blo01g01049 55489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01049 490 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 6 431 - -
Blo01g01049 490 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Blo01g01049 490 TIGRFAM caca2: calcium/proton exchanger 58 422 - -
Blo01g01049 490 TIGRFAM cax: calcium/proton exchanger 76 422 IPR004798 GO:0006816|GO:0015369
Blo01g01049 490 Pfam Sodium/calcium exchanger protein 279 418 IPR004837 GO:0016021|GO:0055085
Blo01g01049 490 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016021|GO:0055085
Blo01g01049 490 Gene3D - 122 261 IPR044880 -
Blo01g01049 490 Gene3D - 267 423 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01049 Blo-Chr1:34017284 Blo05g00015 Blo-Chr5:147481 7.10E-116 dispersed
Blo01g01049 Blo-Chr1:34017284 Blo15g00403 Blo-Chr15:5754119 6.38E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01049 K07300 - csv:101213857 647.891