Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g01107 | ATGAGGCCGATTTTGATGAAAGGGCACGAGAGGCCATTGACGTTCCTCAAGTATAATAGGGACGGTGACCTCTTATTCTCCTGCGCCAAGGATCACAACCCGACTGTTTGGTATGCTGATAATGGCGAGCGTTTGGGTACTTATCGTGGCCATAACGGTGCCGTCTGGTGCTGCGACGTCTCCAGGGATTCAATGCGTCTGATCACTGGAAGTGCAGATCAGACGGCTAAGGTGTGGAATGTTCAAACAGGCCAACAACTCTTCACTTTTAGTTTTGGCTCGCCAGCAAGAGCCGTCGATTTCTCTGTTGGTGACAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTGCCTTCTGCTATTCATGTTAAACGAATTGCCCAAGACCCTGTCGATCAGACGAGTGATTCTGTGCTAGTTATTAAGGGTCCTCAAGGAAGAATTAATAGAGCTATATGGGGACCCCTAAACAAAACAATTATAAGTGCTGGAGAAGATGCTATGATTCGTATTTGGGATTCCGAGACAGGTAAACTTATTAAAGAATCTGATAAGGAGCTCGGGCACAAGAAAACAATTACTTCACTTTCAAAATCAGCTGATGGTTCACATTTTCTCACTGGTTCCTTGGATAAATCTGCGAAATTGTGGGATGTCAGAACATTGACCCTAATCAAGACCTATGTGACAGAGCGCCCAGTTAACGCAGTTGCTATTTCACCACTGCTTGACCATGTTGTGATTGGTGGTGGACAGGATGCATCTGCTGTCACAACAACTGATCATCGTGCTGGAAAGTTTGAAGCCAAATTTTTCGACAAGATCCTTCAAGAGGAAATTGGAGGTGTAAAAGGGCATTTTGGACCAATAAATGCTTTGGCGTTTAATCCTGACGGCAAAAGCCCTCGAAAATCCTATTTGGCCACAACTGTTGCTATGCTGGGACGAGGAGATTGTATTTGTCTTTTAGCCAACTGTTTAGGCAGGAATGGAACCCATGACTGTGGTGGTAAAGCATCTTAG | 1026 | 44.83 | MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWYADNGERLGTYRGHNGAVWCCDVSRDSMRLITGSADQTAKVWNVQTGQQLFTFSFGSPARAVDFSVGDKLAVITTDPFMELPSAIHVKRIAQDPVDQTSDSVLVIKGPQGRINRAIWGPLNKTIISAGEDAMIRIWDSETGKLIKESDKELGHKKTITSLSKSADGSHFLTGSLDKSAKLWDVRTLTLIKTYVTERPVNAVAISPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSPRKSYLATTVAMLGRGDCICLLANCLGRNGTHDCGGKAS | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 39402052 | 39405647 | - | BLOR01107 | Blo01g01107 | 55547 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 187 | 222 | - | - | |
Blo01g01107 | 341 | SMART | WD40_4 | 277 | 325 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SMART | WD40_4 | 135 | 174 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SMART | WD40_4 | 177 | 219 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SMART | WD40_4 | 1 | 38 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SMART | WD40_4 | 41 | 80 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SMART | WD40_4 | 222 | 261 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 142 | 183 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | SUPERFAMILY | WD40 repeat-like | 4 | 301 | IPR036322 | GO:0005515 | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 142 | 179 | - | - | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 187 | 228 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 67 | 81 | IPR019775 | - | |
Blo01g01107 | 341 | Hamap | Eukaryotic translation initiation factor 3 subunit I [EIF3I]. | 1 | 312 | IPR027525 | GO:0003743|GO:0005737|GO:0005852 | |
Blo01g01107 | 341 | PRINTS | G protein beta WD-40 repeat signature | 67 | 81 | IPR020472 | - | |
Blo01g01107 | 341 | PRINTS | G protein beta WD-40 repeat signature | 161 | 175 | IPR020472 | - | |
Blo01g01107 | 341 | PRINTS | G protein beta WD-40 repeat signature | 206 | 220 | IPR020472 | - | |
Blo01g01107 | 341 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 302 | - | - | |
Blo01g01107 | 341 | CDD | WD40 | 7 | 301 | - | - | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 48 | 85 | - | - | |
Blo01g01107 | 341 | Gene3D | - | 1 | 320 | IPR015943 | GO:0005515 | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 48 | 89 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 161 | 175 | IPR019775 | - | |
Blo01g01107 | 341 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 6 | 47 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 302 | - | - | |
Blo01g01107 | 341 | Pfam | WD domain, G-beta repeat | 43 | 80 | IPR001680 | GO:0005515 | |
Blo01g01107 | 341 | Pfam | WD domain, G-beta repeat | 189 | 219 | IPR001680 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01107 | Blo-Chr1:39402052 | Blo08g00269 | Blo-Chr8:3410978 | 1.02E-35 | dispersed | |
Blo01g01107 | Blo-Chr1:39402052 | Blo05g00724 | Blo-Chr5:25414576 | 6.97E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g01107 | K03246 | - | csv:101211648 | 584.334 |