Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01115 ATGGCGACCCCTAGGTTCCGAGCTCTTCTCCGGAAAAAATGGTCTAGGAAGAACTGGGCAATCGTCGGGGCTGCTTTCGCCTTCATCCTTTTTTTCGTATCTTTTGCGTCCGATGGATATCGACAAGACTCCCGCTCAAATGTTCGATTCGAACTCGCCCCTCGGACTGCGGATTTGGTCGGTTTGACTCTGTTACGCAATGCTAAGGATAGGGGAGCTGTGTGTTTGGATGGGAGTTTGCCTGGGTATCATTTTCATAAGGGTTTCGGGTCTGGTTCTAGTAATTGGGTGCTTCACATTGAGGGAGGAGGTTGGTGTGATTCAGTTGAATCTTGTTCTTCGCGTAAAACAACCTCTTTAGGTTCATCCAAGTTCATGGAAACTAAAGATCGCTTCGCCGGAATTTTAAGTCATGACCCATTACAGAATCCTGATTTCTTTAACTGGAACAAAGTCAAGATACGCTATTGTGATGGAGCATCTTTCTCTAGCAACCCTGAAAGTGAAATGAAGAATGGACCTAAACTTTACTTCAGAGGAAATCTCATCTGGGAAGCCGTTATGGATGAGCTATTAGCAGCTGGCTTGTCCAAAGCAAAAAATGCTCTTCTTTCAGGATGCTCTGCTGGTGGTTTGGCAACCCTAATCCATTGTGATGACTTTCGAATGCGACTCTCGAAGGATGCAACAGCAAAGTGTCTAGCTGATGCTGGGTTTTTCCTTGATGTGAAAGACGTTACTGGAAATCATACTATGAGATCTTTCTATAGAGATACTGTCTACCTTCAGTCTAGTTATAAACTAACTCTAGTAAGCAGTGGTGTGGCAAAAACTTTACACAAGGATTGTATTGGAAAAGAGGATGCAGGGAAGGCAGGTTTTCTCTCTTTAACAATTCACAGTGTCTATTATGGCTGTTTCTTTCCACGGGAAGTTGTAAAAAACATACGCACACCAGTGTTCCTTGTCAACCCTGCTTATGATTTCTGGCAGATACAACATGTCTTAGCACCTGATGGATCAGATCCTGCTGGCTATTGGCGGAGCTGTAAACTTAACATTCGTAATTGCAATCATGAGCAGCTAAAAACTCTACATGAATTTCGAAGTTCTTTGCTGAAGTCGCTGGATGAGTTCCAGCAAATGAAAGGAGGGGGAATGTTTATAAATTCTTGCTTCATTCATTGCCAGACATGGTTTACAGAGACATGGCATTCTCCCACTTCTCCAAGAATAAACAATAAGACAATAGCCGAAGCAGTAGGTGATTGGTACTTTGACCGGCAAGTGATGAAGCTAATCGACTGTCCTTATCCTTGCAATCCCACATGCTTCAATATGGATTTGAATCGAGGTCGATCCATTTTAGAATTGGCCACGAAAAACGAGACTTAA 1395 43.15 MATPRFRALLRKKWSRKNWAIVGAAFAFILFFVSFASDGYRQDSRSNVRFELAPRTADLVGLTLLRNAKDRGAVCLDGSLPGYHFHKGFGSGSSNWVLHIEGGGWCDSVESCSSRKTTSLGSSKFMETKDRFAGILSHDPLQNPDFFNWNKVKIRYCDGASFSSNPESEMKNGPKLYFRGNLIWEAVMDELLAAGLSKAKNALLSGCSAGGLATLIHCDDFRMRLSKDATAKCLADAGFFLDVKDVTGNHTMRSFYRDTVYLQSSYKLTLVSSGVAKTLHKDCIGKEDAGKAGFLSLTIHSVYYGCFFPREVVKNIRTPVFLVNPAYDFWQIQHVLAPDGSDPAGYWRSCKLNIRNCNHEQLKTLHEFRSSLLKSLDEFQQMKGGGMFINSCFIHCQTWFTETWHSPTSPRINNKTIAEAVGDWYFDRQVMKLIDCPYPCNPTCFNMDLNRGRSILELATKNET 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40014037 40017519 + BLOR01115 Blo01g01115 55555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01115 464 PANTHER PECTIN ACETYLESTERASE 4 13 444 - -
Blo01g01115 464 Pfam Pectinacetylesterase 57 430 IPR004963 GO:0016787
Blo01g01115 464 PANTHER NOTUM-RELATED 13 444 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01115 Blo-Chr1:40014037 Blo06g00789 Blo-Chr6:31184078 2.68E-134 dispersed
Blo01g01115 Blo-Chr1:40014037 Blo02g01173 Blo-Chr2:43410797 5.63E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01115 K19882 - qsu:111992987 615.92