Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01165 ATGGCTGAACCATTCCAACCGAACCGGTTCAGGGTGTTGGCTGCTTGGTTCTGGAAATCAGAAAGAGGAGAGTACTTGGTTGGCCCTTGGCCATTTTTAAACTTCGTTTCCATTTTGATTCCTGTTTTCATTCCCATTTTTGTTTCCATCTCTGTTCCCGTTTCCGTTTTCGTTCCCATTTCTGCTTCTGTTGCTGTTCCAGTTCCTGCTCCCGACTTTGTTTCTGTACTCATTCCAGGAGAAGCTCAACTAATTGAATCCACTATTGTCGTACAGTTGTGCAATCACGTTCTTGGTTACCTTGATTGGTTAGAGATTGGAGGAATCTGTGGCGGTAGGGTAGATCTTTGTTTGCTTCAACCACCTAGGGTAGACAGTCTCGCAGTCCCGACAAGGGAAAGGAAGGACTACAACGACCCACCTCCGACGCCTCTGATCGACCCCGAAGAGCTAACTCAGTGGTCTTTATACAGAGCTGTCATAGCTGAATTCATTGCCACTCTTTTGTTCCTCTACGTCACGGTGCTCACGGTGATCGGATACAATGTCCAGACCGACAAAACTCGCGGTGGCGAAGATTGCAGCGGTGTTGGAATTCTCGGCATTGCTTGGGCCTTCGGCGGAATGATCTTTATCCTCGTTTACTGCACTGCTGGAATCTCCGGCGGCCATATTAATCCTGCTGTAACTTTCGGCCTGTTTCTAGCTCGCAAGGTCTCGTTAATCCGAGCTCTTCTGTATATGGTAGCTCAGCGCTTGGGAGCAATTTGTGGGTGTGGGCTTGTGAAGGCGTTTCAGAATGCTTACTATGAGGAATACCACGGCGGAGCTAACATGCTCACCGCTGGTTACAACAAAGGCACTGGATTAGCAGCTGAAATCATCGGAACTTTCGTTCTTGTCTGCAACAGACCCGTCTTGGCCCCACTTCCGATTGGATTTGCGGTGTTTATGGTTCACCTAGCGACCATTCCCATCACCGGCACCGGAATCAACCCAGCTCGAAGCTTTGGAGCTGCAGTGATTTATAATAAAGATAAAGCCTGGGATGATCAATGGATATTCTGGCTAGGGCCATTTGTTGGAGCCGCCATAGCTGCATTCTATCACCAGTATATTCTTAGAGCAGGGGCAGTGAAAGCTTTGGGCTCTTTCAGAAGCTCATACTGA 1170 48.46 MAEPFQPNRFRVLAAWFWKSERGEYLVGPWPFLNFVSILIPVFIPIFVSISVPVSVFVPISASVAVPVPAPDFVSVLIPGEAQLIESTIVVQLCNHVLGYLDWLEIGGICGGRVDLCLLQPPRVDSLAVPTRERKDYNDPPPTPLIDPEELTQWSLYRAVIAEFIATLLFLYVTVLTVIGYNVQTDKTRGGEDCSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALLYMVAQRLGAICGCGLVKAFQNAYYEEYHGGANMLTAGYNKGTGLAAEIIGTFVLVCNRPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKDKAWDDQWIFWLGPFVGAAIAAFYHQYILRAGAVKALGSFRSSY 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 42789605 42801698 - BLOR01165 Blo01g01165 55605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01165 389 PANTHER AQUAPORIN PIP2-4-RELATED 133 388 - -
Blo01g01165 389 PRINTS Major intrinsic protein family signature 206 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 PRINTS Major intrinsic protein family signature 243 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 PRINTS Major intrinsic protein family signature 158 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 PRINTS Major intrinsic protein family signature 313 335 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 PRINTS Major intrinsic protein family signature 353 373 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 CDD MIP 158 373 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 Pfam Major intrinsic protein 150 370 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01165 389 Gene3D Glycerol uptake facilitator protein. 143 389 IPR023271 -
Blo01g01165 389 SUPERFAMILY Aquaporin-like 149 375 IPR023271 -
Blo01g01165 389 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 133 388 IPR034294 -
Blo01g01165 389 ProSitePatterns MIP family signature. 224 232 IPR022357 -
Blo01g01165 389 TIGRFAM MIP: MIP family channel proteins 162 370 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01077 Blo-Chr1:37275017 Blo01g01165 Blo-Chr1:42789605 3.29E-08 dispersed
Blo01g01165 Blo-Chr1:42789605 Blo13g00923 Blo-Chr13:31718196 8.16E-138 dispersed
Blo13g00282 Blo-Chr13:14353214 Blo01g01165 Blo-Chr1:42789605 1.39E-16 dispersed
Blo12g00016 Blo-Chr12:1108755 Blo01g01165 Blo-Chr1:42789605 4.54E-09 transposed
Blo01g01165 Blo-Chr1:42789605 Blo12g00467 Blo-Chr12:22213450 7.99E-53 wgd
Blo01g01165 Blo-Chr1:42789605 Blo13g01118 Blo-Chr13:33303294 1.16E-144 wgd
Blo01g01165 Blo-Chr1:42789605 Blo14g00177 Blo-Chr14:1386783 3.27E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01165 K09872 - jre:109020874 446.432