Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01167 ATGGAAACGAAAGAGAAAACAAAGGAGGTCGAAAAATGCTTAGATCCTCAGCTATGGCATGCCTGCGCCGGAGGAATGGTTCAAATGCCGCGGGTAGATGCCAAGGTCTTCTACTTTCCTCAGGGCCATGCAGAGCATGCCAGTGGGCCCGTTGATTTCCGGAATTCCCCAAGACTTGCACCTTTTTTTCCCTGCAGAGTTTCTGCAGTTAAATTCATGGCCGATCTGGAAACTGACGAAGTTTATTCGAAGATCAAATTGGTTCCTTTCAGCAGCAGTGAGCTTGATTTTGAGGAAGATAGAATCAGTGGGCTTAATGGGGCTGAAGTGCAGGACAAACCAGCCTCGTTTGCAAAGACCCTGACTCAATCAGATGCCAACAATGGCGGGGGATTCTCCGTTCCAAGATACTGTGCTGAAACGATCTTTCCACGATTGGATTACAATGTGGATCCCCCAGTCCAAAACATTCTCGCCAAGGACGTTCATGGGGAGACTTGGAAATTCCGTCACATTTATAGAGGAACGCCTAGGAGACATCTCTTGACTACTGGTTGGAGTACCTTCGTGAATCATAAGAAGCTCGTTGCGGGCGATTCTATTGTGTTTTTAAGAGCAGAAAATGGAGATTTATGCGTTGGAATTCGAAGGGCAAAGAGAGGAATCGGAGGTGGACCCGAATCGTCATCTGGGTGGAATCCGTCTGGTGGATATGGAGGATATTCAGGGTATTTGAGAGACGAAGAAAGCAAATTACTGAGAAATGCAAATGGTTTGAGCTCGAATGGGAGTTCAATGACATGTAATGGAAAGGTTAGGCCGGAATCAGTCATCGAGGCTGCCATGCTTGCTGCTAATGGACATCCATTCGAAGTCGTTTATTACCCTAGAGCTAGCACACCTGAATTTTGTGTGAAGGCTTCTTCGATGAGAGTGGCAATGCAGATCCGATGGTGCTCTGGAATGAGGTTCAAAATGGCATTTGAAACTGAGGATTCATCGAGAATAAGCTGGTTCATGGGGACTATTTCTTCTGTCCAAGTTGCCGATCCAGTGCACTGGCCGGAATCTCCTTGGCGCCTTCTGCAGGTTACGTGGGATGAGCCGGATTTGCTACAAAATGTTAAACGGGTTAGCCCGTGGCTGGTAGAGGTGGTATCGAACATGTCGGCAATCAATCTCTCCCCATTCTCACCTCCGAGGAAAAAACCGAGATTGCCAAATCACCCTGAATTCCCCTTCGATACCACCATTTTCCCGATGCCAAATGCATTTGCCACGAACAACCACATTCGGCCGAGCAGCCCCTTCGGTTGTCTACCGGACTACTTCCCCCCTGCTGGCATGCAGGGAGCCAGGCATCCTTGTTACAATCAATCCTTCTCGGATCTCCAATTCAACACACTTCACTCGAGCCAATTCCCTGTCGGCTATCCTCCACTCAATACCACATCCGCTTTTATGGGAGTAGTCCCGACTAGTACAATGGTTCAAAAGGGCGTCATGGGTAATGGCCTCTCAAGCTTGTTGACAATGGCAGTGTCGAAAAAACCAGATGACTCAAAAACTCCCCATCTCATGCTTTTTGGCCAAACAATACTGACTGAGCAGCAAATGTCTCAGAGCTCTGGCGATACCATCTCCCCAGGTCCCACCGGCAACAGTTCATCAGATGGGAATGGAGATAAAGTGGCAAATTTGTCAGATGAGTCGGGGCAGACCCTTTTCAACATCGAAACAGGTCATTGTAAAGTCTTTATGGATTCAGAAGATGTAGGTCGAACAATTGATCTCTCTTCACTCGGATCCTACGATGAACTTTGCAAAAAATTGGCAGAATTGTTCGGGATAGAAAAGTCAGAGACGTTAAACCACGTGCTCTATAGGGACGGTTCTGGTGCAGTCAAACACATAGGCGATGAGCCATTCAGTGAGTTCATGAAAACGGCAAGGCGGGTGACGATTCTAATGGATTCGGCAAGTGAATAA 1989 47.56 METKEKTKEVEKCLDPQLWHACAGGMVQMPRVDAKVFYFPQGHAEHASGPVDFRNSPRLAPFFPCRVSAVKFMADLETDEVYSKIKLVPFSSSELDFEEDRISGLNGAEVQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGPESSSGWNPSGGYGGYSGYLRDEESKLLRNANGLSSNGSSMTCNGKVRPESVIEAAMLAANGHPFEVVYYPRASTPEFCVKASSMRVAMQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVHWPESPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSNMSAINLSPFSPPRKKPRLPNHPEFPFDTTIFPMPNAFATNNHIRPSSPFGCLPDYFPPAGMQGARHPCYNQSFSDLQFNTLHSSQFPVGYPPLNTTSAFMGVVPTSTMVQKGVMGNGLSSLLTMAVSKKPDDSKTPHLMLFGQTILTEQQMSQSSGDTISPGPTGNSSSDGNGDKVANLSDESGQTLFNIETGHCKVFMDSEDVGRTIDLSSLGSYDELCKKLAELFGIEKSETLNHVLYRDGSGAVKHIGDEPFSEFMKTARRVTILMDSASE 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 42834256 42836770 - BLOR01167 Blo01g01167 55607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01167 662 SUPERFAMILY DNA-binding pseudobarrel domain 111 220 IPR015300 -
Blo01g01167 662 Pfam Auxin response factor 280 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo01g01167 662 CDD B3_DNA 116 217 IPR003340 GO:0003677
Blo01g01167 662 Gene3D - 577 662 - -
Blo01g01167 662 Gene3D - 317 392 - -
Blo01g01167 662 ProSiteProfiles PB1 domain profile. 580 660 IPR000270 GO:0005515
Blo01g01167 662 PANTHER AUXIN RESPONSE FACTOR 3 657 - -
Blo01g01167 662 Gene3D - 115 219 IPR015300 -
Blo01g01167 662 SMART B3_2 117 219 IPR003340 GO:0003677
Blo01g01167 662 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Blo01g01167 662 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 3 657 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo01g01167 662 MobiDBLite consensus disorder prediction 538 568 - -
Blo01g01167 662 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01167 Blo12g00469 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01167 Blo-Chr1:42834256 Blo13g00924 Blo-Chr13:31721951 0 dispersed
Blo01g01167 Blo-Chr1:42834256 Blo12g00469 Blo-Chr12:22231390 0 wgd
Blo01g01167 Blo-Chr1:42834256 Blo14g00180 Blo-Chr14:1411907 0 wgd
Blo01g01167 Blo-Chr1:42834256 Blo04g00070 Blo-Chr4:598266 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11897 PF02362 B3 1.00E-20 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01167 - - fve:101313821 957.207