Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01172 ATGGAGAACGTTAAGGTGGCCGGACATGAGAATGGATCGTCAGAGAACGGTTCACTGGGGAGCCTGTGCAAGAGCCGGGACCCTTTGAACTGGGGGGCTGCGGTGGAGGCGCTTAGTGGGAGCCACTTGGACGAGGTGAAGAGGATGGTAGCTGAGTATCGCCGGCCAGTGATAAATCTCGGAGGGGAGACTTTGACCATCGCGCAGGTTGCTGCCGTTGCTGGGCGGAGCTCGGACGTATCAGTCGAGCTGTCGGAATCCGCTAGGGCCGGTGTGAAGGCGAGCAGTGACTGGGTGATGGATAGTATGAATAAAGGGACAGACAGCTACGGAGTTACTACTGGGTTTGGTGCAACTTCGCACAGAAGAACTAAAGAAGGTGGCGCTCTGCAGAAGGAACTGATTAGATTTTTGAACGCTGGAATATTCGGGAGCAGAACGGAATCTTGCCACACTTTGCCGCACTCCACCAGCAGAGCCGCCATGCTAGTAAGAATCAATACCCTCCTCCAAGGCTACTCTGGCATAAGATTCGAGATTCTGGAAGCTATAACCAAGCTTCTCAACAGCAATGTTACCCCGTGTTTGCCACTTCGCGGTACCATTACAGCCTCCGGCGACCTCGTTCCTCTCTCCTACATCGCCGGACTTCTCACTGGAAGACCCAACGCCAAAGCCGTTGGCGCCGACGGGAAATCGCTCACTGCTACAGAGGCGTTTGAATGCGCCGGGATTGAATCCGGGTTTTTTGAGCTGCAGCCGAAGGAAGGGCTGGCTCTGGTCAACGGCACCGCTGTCGGATCTGGGTTGGCTTCAGTGGTGCTCTTTGAGGCAAATATTCTCGCTGTGCTGTCGGAGATTCTCTCCGCTGTCTTCGCCGAGGTGATGCAAGGGAAGCCGGAGTTTACAGACCATTTGACCCATAAATTGAAGCACCATCCTGGTCAAATCGAAGCTGCCGCGATAATGGAGCACATTTTGGACGGAAGCTCTTACGTTAAAGCTGCCAAAAAACTTCACGAAATTGATCCGCTGCAGAAACCAAAACAGGATCGCTACGCTCTCCGAACTTCGCCGCAATGGCTCGGCCCGCAAATTGAAGTGATCCGATTCTCAACGAAATCAATCGAAAGAGAAATTAACTCTGTTAACGACAATCCTCTGATCGATGTTTCTAGAAACAAAGCCTTGCACGGCGGAAACTTTCAAGGAACTCCAATCGGAGTGTCCATGGATAATACCCGTCTAGCCATTGCTTCAATTGGGAAGCTCATTTTCGCCCAATTTTCTGAATTGGTGAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGGGGGTAGAAACCCTAGTTTGGATTATGGATTCAAAGGAGCCGAAATCGCCATGGCTTCGTACTGCTCTGAGCTTCAGTACCTCGCAAACCCCGTAACCAGCCATGTCCAAAGTGCAGAGCAACACAATCAAGACGTTAACTCTCTTGGCCTGATATCGTCGAGAAAAACAGCTGAATCCGTCGATATTTTGAAATTGATGTCCTCCACCTTCCTGATTGCTCTTTGTCAAGCGATTGATTTGAGGTATTTGGAGGAGAACTTGAAGAACACAGTGAAGAACACAGTCAGTCAAGTTGCCAAGAGGGTTCTAACCACCGGCGCTAACGGACAACTCCACCCATCAAGATTCTGCGAGAAGGACTTGCTCAAAGTCGTCGACAGAGAATATGTATTCGCTTACATTGACGACCCTTGCAGTGCAAACTACCCATTAATGCAGAAGCTCAGACAAGTTCTCGTGGAGCACGCCCTCACCAACGGAGAAGGCGAGAAGAACGCAAGCACTTCGGTCTTCCAAAAAATCACTGCATTTGAAGAGGAGTTGCTGGCGATTCTGCCGAAAGAAGTTGAAGCGACGAGGGTGGCAATCGAAAACGGAAACGCCGCCATTGGAAACCAGATAAAGAACTGCAGATCGTACCCATTGTATAAGTTCGTGAGGGAAGAGCTGGGAACAGGGCTGCTGACAGGGGAGAAGGTGAAGTCTCCGGGAGAAGAATGCGACGTCGTGTTCACGGCAATGTGCGAGGGAAAACTAATCGACCCTATTCTGGCCTGCTTGAGAGACTGGAATGGCGCGCCAATCCCTATTTGCTAG 2157 50.81 MENVKVAGHENGSSENGSLGSLCKSRDPLNWGAAVEALSGSHLDEVKRMVAEYRRPVINLGGETLTIAQVAAVAGRSSDVSVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGSRTESCHTLPHSTSRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNAKAVGADGKSLTATEAFECAGIESGFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAESVDILKLMSSTFLIALCQAIDLRYLEENLKNTVKNTVSQVAKRVLTTGANGQLHPSRFCEKDLLKVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGEGEKNASTSVFQKITAFEEELLAILPKEVEATRVAIENGNAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLRDWNGAPIPIC 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43104660 43107320 + BLOR01172 Blo01g01172 55612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01172 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Blo01g01172 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Blo01g01172 718 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 718 - -
Blo01g01172 718 Pfam Aromatic amino acid lyase 65 540 IPR001106 -
Blo01g01172 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Blo01g01172 718 Gene3D - 20 264 IPR024083 -
Blo01g01172 718 MobiDBLite consensus disorder prediction 1 21 - -
Blo01g01172 718 PANTHER HISTIDINE AMMONIA-LYASE 23 718 IPR001106 -
Blo01g01172 718 CDD PAL-HAL 63 528 IPR001106 -
Blo01g01172 718 Gene3D - 531 652 IPR023144 -
Blo01g01172 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01172 Blo12g00472 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01172 Blo-Chr1:43104660 Blo04g00321 Blo-Chr4:2562592 0 dispersed
Blo01g01172 Blo-Chr1:43104660 Blo12g00472 Blo-Chr12:22294829 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01172 K10775 - rcu:8284514 1236.09