Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01180 ATGGTCTACGATGAGCTGAAGAAGCCCATCGAGGAGATGAAGCCATTGACACTAGATGAAGATTTACCGGGAATGGGCCAGTACTACTGCTTGCATTGCGACCGATACTTTGCGAATATGACAGTGAGAGATGAGCACTTCAAGACCAAACGTCACAAGAAGCGTGTAAAACAAATGATGGGACGGGCTCCACACACTCAACTTGATGCGGACATGGCTGGTGGAATGGGTGCTCCTGATAATGGGCCAAAGCTCATGTTAATG 264 48.11 MVYDELKKPIEEMKPLTLDEDLPGMGQYYCLHCDRYFANMTVRDEHFKTKRHKKRVKQMMGRAPHTQLDADMAGGMGAPDNGPKLMLM 88
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43482138 43483162 + BLOR01180 Blo01g01180 55620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01180 88 ProSitePatterns Zinc finger C2H2 type domain signature. 30 52 IPR013087 -
Blo01g01180 88 Gene3D Classic Zinc Finger 15 78 - -
Blo01g01180 88 Pfam Zinc-finger double-stranded RNA-binding 27 53 IPR022755 -
Blo01g01180 88 MobiDBLite consensus disorder prediction 48 88 - -
Blo01g01180 88 PANTHER EXPRESSED PROTEIN 1 87 - -
Blo01g01180 88 SMART ZnF_U1_5 25 59 IPR003604 GO:0003676|GO:0008270
Blo01g01180 88 SUPERFAMILY beta-beta-alpha zinc fingers 14 78 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01180 K14821 - qsu:112025713 166.392