Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01185 ATGCCAGGATCTCGAGCTGAACTGCTGCTCAACAGGTTTTGCAATGCCTCCATCATGGCTACGATAGGGTTAAACACTGTCATCTCAGTGATCTGTGAAAAAGAAGGGTCGCTCAAGGACTCATCCAATATAATCACACAGAAAGACGACAATTCAAAGATGGCACCGCCTTATGAGCCAAGAGGAACAAAACTCCGGTTCATTTCTTTGAGAAAAACCAGTGTTGGAACGAGGGGATACTGCGAGAAAGGGAGAGATATAATGGACAGAGAGTGGGGATCGAAGCCGGGCAGTGGAGGCGCTGCATCGGCGCAGAATGAAGCAATCGACCGTAGGGAGCGTCTCAGGAGACTGGCTCTTGAGACCATCGATCTCGCAAAAGATCCCTATTTTATGCGCAACCATCTCGGGAGTTATGAGTGTAAACTTTGTTTGACTCTTCACAACAATGAGGGAAATTATTTGGCGCACACACAAGGGAAGCGGCATCAAACTAATTTGGCTAAACGAGCGGCTCGTGAAGCCAAAGATGCTCCTGCTCAGCCCCAGCCTCACAAACGCAAAGTTTCTATACGCAAATCTGGTTTGCCTGGGTACAGGGTTACAAAGCAATTTGATCTTGAAACAACGCAGAGGTCTTTGCTTTTTCAGATTGAATATCCTGAAATTGAAGATCTTGCAAAGCCAAGACATAGATTTATGTCCTCGTATGAGCAGAGAGTTCAACCTTTTGATAAAAGATATCAGTACCTTTTGGTTGCAGCTGAGCCGTATGAAATCATTGCTTTCAAGGTTCCAAGCACAGAAATAGACAAATCAACGCCAAAATTTTTCTCAAATTGGGATCCAGACTCAAAAATGTTCACGTTGCAATTATACTTCAAAATCAAGCCACCTGAACCGATCAAGACTCAAAGTGCTCCTGCACCCAATGGCACAGCAGCTCCTGGAGCTCCTCCAAGGCCTTTGCTCCCACCCCCACCACCACCCCAGGGTCTACCACCTCGTGCAGTGCCACCATCAATACCTCCTCCTACCTTGGCCAATGGCCCTCGGCCAATGCCTCCGACTGGAACTCCGCCTGTCCCTCCTCCACCGCCTACCATGGGAAATTTCAATCCTCCGATGCCTCCACATGGTTTTCCCGCCCCGCCGACACAAGGGCAGGCTGTTCGGCCGCCGCCACCTCCTCCAAATATGGGACAAGCCCCAGGGCCGCCTCCTTTTCAGTGA 1233 49.23 MPGSRAELLLNRFCNASIMATIGLNTVISVICEKEGSLKDSSNIITQKDDNSKMAPPYEPRGTKLRFISLRKTSVGTRGYCEKGRDIMDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVSIRKSGLPGYRVTKQFDLETTQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLVAAEPYEIIAFKVPSTEIDKSTPKFFSNWDPDSKMFTLQLYFKIKPPEPIKTQSAPAPNGTAAPGAPPRPLLPPPPPPQGLPPRAVPPSIPPPTLANGPRPMPPTGTPPVPPPPPTMGNFNPPMPPHGFPAPPTQGQAVRPPPPPPNMGQAPGPPPFQ 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43797906 43803669 - BLOR01185 Blo01g01185 55625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01185 410 MobiDBLite consensus disorder prediction 300 410 - -
Blo01g01185 410 Gene3D - 177 300 - -
Blo01g01185 410 SUPERFAMILY beta-beta-alpha zinc fingers 135 169 IPR036236 -
Blo01g01185 410 MobiDBLite consensus disorder prediction 313 410 - -
Blo01g01185 410 SMART ZnF_U1_5 136 170 IPR003604 GO:0003676|GO:0008270
Blo01g01185 410 PANTHER SPLICING FACTOR 3A SUBUNIT 2 88 396 - -
Blo01g01185 410 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 195 288 IPR031781 -
Blo01g01185 410 Pfam Zinc-finger of C2H2 type 139 163 - -
Blo01g01185 410 SMART CactinC_cactus_3 176 301 - -
Blo01g01185 410 ProSiteProfiles Zinc finger matrin-type profile. 139 169 IPR000690 GO:0003676|GO:0005634|GO:0008270
Blo01g01185 410 Gene3D Classic Zinc Finger 133 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01185 Blo-Chr1:43797906 Blo05g00200 Blo-Chr5:2042326 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01185 K12826 - qsu:111995165 412.149