Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01187 ATGTCTGAGGAGGGGGCAGAGTCATCGACTAGGGTGCATCGTCCTTCATGTACTGCAGAGGCAATGCTGGAGGCTGTTCCTCCAAGGGGGCTCCAAGCTGTTTCTCTTAGGGGCCTAGAGACAGACGCCATGCCTTTCCGGAGTTTCGCTTTAGGAACGCAGCAGGAGTTCGTTCAACCGGAGCTTTGGAAGTGCGGCGTGGCGGAGTTTATCTCCACGCTGATCTTCGTCTTCGCCGGCCAGGGATCAGGAATGGCGTTTGCCAAGCTATCGGATAATGGCTCCACCACTGAAGCCGCAATAATCGCAGCCTCTCTCGCCCACGGTTTCGGTCTCTTCATTGGCGTCGCCGTCAGCTTCAACATCTCCGGTGGGCACGTCAATCCTGCCGTCACCTTTGGTGCATTCGTGGGCGGAAACGTTACTCTCCTCCGCCTCATTGTTTACTGGATCGGTCAGCTTCTCGGCTCTGTAGCTGCATGTGGTCTTCTTAAATTCACCACCCACGGCATGGTTACGACACCATTTTTGTTCTCCTCTGATGTAACAGTCTGGAACGCATTCGTTTTCGAGATCGTGATGACTTTCGGTCTAGTCTATACGGTCTATGCCACAGCAATTGATCCAAATAAAGGAACTTTAAAGACGATTGCTCCTATCGCTATCGGCTTCATCGTTGGCGCCAATGTTCTGGCCGGTGGAGCCTTCGAGGGGGCGTCGATGAACCCGGCCGTCTCATTTGGGCCCGCTTTGGTGAGCTGGAGTTGGGACCACCAGTGGGTCTACTGGGCCGGACCCCTCATCGGCGGTGGCATCGCCGGCCTTGTTTTTGAGGGTCTTTTCATCAAGCAGACCCACGACCCTCTCCCTCAATAA 876 54.91 MSEEGAESSTRVHRPSCTAEAMLEAVPPRGLQAVSLRGLETDAMPFRSFALGTQQEFVQPELWKCGVAEFISTLIFVFAGQGSGMAFAKLSDNGSTTEAAIIAASLAHGFGLFIGVAVSFNISGGHVNPAVTFGAFVGGNVTLLRLIVYWIGQLLGSVAACGLLKFTTHGMVTTPFLFSSDVTVWNAFVFEIVMTFGLVYTVYATAIDPNKGTLKTIAPIAIGFIVGANVLAGGAFEGASMNPAVSFGPALVSWSWDHQWVYWAGPLIGGGIAGLVFEGLFIKQTHDPLPQ 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43990337 43994432 + BLOR01187 Blo01g01187 55627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01187 291 ProSitePatterns MIP family signature. 126 134 IPR022357 -
Blo01g01187 291 Pfam Major intrinsic protein 58 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PANTHER AQUAPORIN-8 44 290 IPR034294 -
Blo01g01187 291 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PRINTS Major intrinsic protein family signature 108 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PRINTS Major intrinsic protein family signature 145 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 SUPERFAMILY Aquaporin-like 56 288 IPR023271 -
Blo01g01187 291 Gene3D Glycerol uptake facilitator protein. 47 289 IPR023271 -
Blo01g01187 291 CDD MIP 67 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo01g01187 291 PANTHER AQUAPORIN TIP1-1 44 290 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01187 Blo07g01383 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01187 Blo-Chr1:43990337 Blo07g01383 Blo-Chr7:33920361 1.82E-124 dispersed
Blo01g01187 Blo-Chr1:43990337 Blo15g00130 Blo-Chr15:1155224 7.28E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01187 K09873 - jre:108996816 373.244