Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01195 ATGGCAGAAGAGCACAGATGCGAAGCGACCGAAGGCCACTGCCTCTGCGCAAACAACTGTGGCTTTTTTGGCAGCCCAGCGACGATGGACCTTTGCTCCAAATGTTACAGAGACTACCGTCTGAAAGAGCAACAAGAAGCCTCCACCAAATCCACCCTCGAAGCTGCTTTCTCAGCCTCCACAACGTCTCCTTCCTCTTCGCCGATCAAACCACTCTCCGATGAATCTGCTCCTCCTCCCTTAGCCCTCCCCGAGATAGCCGAAGACTTGAGAATCCAGTCGGTGATGGCAGACGTTCCGGAGGAGGCGAGCCGGCCGAACCGGTGCACGGTTTGCCAAAAAAGGGTCGGGTACACCGGATTCCGATGCAAATGTGGGACCACATATTGTGGGGTCCACAGATATCCGGAGAGGCACGGCTGTAAGTTCGATTTCAAGAAAGTGGGGAAGGAGGAGATAGCCCGTGCCAATCCTCTGTTCCGCACTGCAGGTCGGTGCCGATTCACGCCCTCTCGCCTCTTGTCTTGCGTCACTCGCCGCTTGCCTCTCGGTGGTCAGTGCTCACGCGTCACGACTGCACGTCGCTCCAGATCAGTCTCAGCTCTTGCGTCGCTCAGTGGTCACTGCCCACTAGTCAGTGCTACTGCTCACGACTGCACGTCGCTGGTCGCTCCCTCTCGCCTCTTGGTCTCAGCTTTTGCGTCGCTTGCACTGTGGTCAATGGCTCAAACTCTCGGTCAGTCGGAGTGTCAGACTCTCGGTCTTGGGCGTGTGGGGGTTCTGGTGAATTGTGACTGTCCATACGGTGATTCCTCCTCCGTAGGGAGTGGTAATGACTATAATGAAGATGATGTGCCAGTTGAGGAAGAGGCGTTCCAAGAAGATCCCTCGTTTTGGAGGTGTCAAATGTTCAAATTTTTAGCTTACGATAGCGCTTGGAGTGGGTTGGTCGATAAGCGTGTCGTGGTCGCCATCGAGGTAGAGATCTTTATACTTTCTACACTGCATTACATCATGGTTTTCAAAACTATTATTTTGTGGACTACCACACCTAAAAACCAGAGGGGACTGTTTGACAGCACACGGTTGTTGGAGTTGAAGCCGAGTGGAGATTTCTATTGGTTAGTTGAGTGGGCATCACCGCTGGTGTTGGCTTTGGTGTCAATTCCGATTGCATTCTTAGGTCTTCGTCTTGTTTTAGGTGTGTCGAAAGCTTGGAACGTCATTATTCAAATGAATCCTCTTGATGCTTTGGGCAGTCTTGGTATTAAAGCATCACGAGACTATCTCATGCATCTTCTACTGTACGAAGATTTCTTGTGTGCACGTACAAAATGGTCACGATTTCCGTCCAGAGCCGTCGAGGTTAACGCCCCGTTTGTACCCTGTCTAGCGGCGTCAAACGGAGTCGAAGGGCGATGGCAGAGCCGACGGTCGAATCGTCTAGAGCCGACCGAAGTACGACATTCGCTGGCTGTTGGATCGTCTGGATCGACGGCCAGGATTGAATCTGGCGTCCCTGCCAGATGCGATGATGGACAAAGATCCTTGGCCGTTGGATCGAGCGAGGGACGTGCCTCGGATGGACGGCCAGGATTTAATCCGCTTGGCGAAGACGGACGTTGA 1626 53.01 MAEEHRCEATEGHCLCANNCGFFGSPATMDLCSKCYRDYRLKEQQEASTKSTLEAAFSASTTSPSSSPIKPLSDESAPPPLALPEIAEDLRIQSVMADVPEEASRPNRCTVCQKRVGYTGFRCKCGTTYCGVHRYPERHGCKFDFKKVGKEEIARANPLFRTAGRCRFTPSRLLSCVTRRLPLGGQCSRVTTARRSRSVSALASLSGHCPLVSATAHDCTSLVAPSRLLVSAFASLALWSMAQTLGQSECQTLGLGRVGVLVNCDCPYGDSSSVGSGNDYNEDDVPVEEEAFQEDPSFWRCQMFKFLAYDSAWSGLVDKRVVVAIEVEIFILSTLHYIMVFKTIILWTTTPKNQRGLFDSTRLLELKPSGDFYWLVEWASPLVLALVSIPIAFLGLRLVLGVSKAWNVIIQMNPLDALGSLGIKASRDYLMHLLLYEDFLCARTKWSRFPSRAVEVNAPFVPCLAASNGVEGRWQSRRSNRLEPTEVRHSLAVGSSGSTARIESGVPARCDDGQRSLAVGSSEGRASDGRPGFNPLGEDGR 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 44357674 44374870 - BLOR01195 Blo01g01195 55635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01195 541 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Blo01g01195 541 Gene3D - 87 164 IPR035896 -
Blo01g01195 541 MobiDBLite consensus disorder prediction 52 80 - -
Blo01g01195 541 MobiDBLite consensus disorder prediction 475 541 - -
Blo01g01195 541 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 163 - -
Blo01g01195 541 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Blo01g01195 541 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 56 - -
Blo01g01195 541 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 163 - -
Blo01g01195 541 Pfam A20-like zinc finger 15 37 IPR002653 GO:0003677|GO:0008270
Blo01g01195 541 Gene3D - 1 67 - -
Blo01g01195 541 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Blo01g01195 541 MobiDBLite consensus disorder prediction 52 72 - -
Blo01g01195 541 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Blo01g01195 541 SUPERFAMILY AN1-like Zinc finger 96 160 IPR035896 -
Blo01g01195 541 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01195 Blo-Chr1:44357674 Blo08g00041 Blo-Chr8:347988 1.54E-39 dispersed
Blo12g00724 Blo-Chr12:25578503 Blo01g01195 Blo-Chr1:44357674 6.64E-26 dispersed
Blo12g00831 Blo-Chr12:26626756 Blo01g01195 Blo-Chr1:44357674 2.43E-08 dispersed
Blo04g01208 Blo-Chr4:22694577 Blo01g01195 Blo-Chr1:44357674 9.65E-16 transposed
Blo12g00353 Blo-Chr12:19687766 Blo01g01195 Blo-Chr1:44357674 1.81E-07 transposed
Blo19g00376 Blo-Chr19:23861445 Blo01g01195 Blo-Chr1:44357674 8.93E-10 transposed
Blo01g01195 Blo-Chr1:44357674 Blo12g00494 Blo-Chr12:22735088 1.43E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01195 - - csv:101211758 214.542