Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01214 ATGGGGGCATCGCTGTCTGGCCTGACCGAAGGCTTCAACGGTTCGACCGTTGCTCCGGGTTTGGGTGACATACCTGAAAGCTGCGTCGCCTGTGTTTTTCTCTATCTGACTCCACCGGAGATTTGCAACCTCGCGCGGCTCAATCGGGCATTTCGTGGTGCGGCTTCGTCTGATTCTGTTTGGGAAAGTAAGTTGCCTTCTAATTACCATGATCTGCTCGACTTGTTGCCTCCGGAGAGGTACCAAAATTTATCAAAAAAGAATATATTCGCTCTGCTTTCTCGTCCGGTGCCGTTTGATGATGGCAAAAAGGAAGTGTGGCTGGATAGATTTACTGGAAGGGTTTGCATGTCAATATCGGCGAAGGCAATGGCTATAACTGGAATCGATGATAGGAGATACTGGAATTGGATTCCTACAGAAGAGTCCAGATTCCATGTTGTTGCATATTTACAGCAAATTTGGTGGTTTGAAGTAGATGGGGTGGTAAAATTCCCTTTTCCTGCAGATATATATACCCTTTCCTTCAGGCTTCACCTCGGAAAGTTTTCAAAAAGGCTTGGAAGACGAGTGAGCAACTTTGATCATACCCATGGCTGGGAAATAAAACCAGTTCGATTTGAATTGTCAACATCAGATGGTCAACAAGCATCGTGCGAATGCTGTTTAGATGAGACTGAACAGGATCTAAATGGACACCATAAACGTGGGTGTTGGGTAGATTACAAAGTTGGCGAATTCATTGTAAATGATTCAGAACCTGTTCCTGAAGTTAGATTTTCATTGAAACAAATTGACTGCACCCATTCAAAAGGTGGGCTTTGTGTGGATTCTGTATTCATCATTCCAAGTGATCTGAAAGGGTGGAAAAAAAAAAGGTTTTGA 885 43.95 MGASLSGLTEGFNGSTVAPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDSVWESKLPSNYHDLLDLLPPERYQNLSKKNIFALLSRPVPFDDGKKEVWLDRFTGRVCMSISAKAMAITGIDDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPFPADIYTLSFRLHLGKFSKRLGRRVSNFDHTHGWEIKPVRFELSTSDGQQASCECCLDETEQDLNGHHKRGCWVDYKVGEFIVNDSEPVPEVRFSLKQIDCTHSKGGLCVDSVFIIPSDLKGWKKKRF 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45723000 45725536 + BLOR01214 Blo01g01214 55654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01214 294 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
Blo01g01214 294 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 293 - -
Blo01g01214 294 SUPERFAMILY F-box domain 13 90 IPR036047 GO:0005515
Blo01g01214 294 Pfam Phloem protein 2 115 283 IPR025886 -
Blo01g01214 294 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01214 Blo07g01367 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01214 Blo-Chr1:45723000 Blo06g01114 Blo-Chr6:34551495 7.72E-105 dispersed
Blo01g01214 Blo-Chr1:45723000 Blo07g01367 Blo-Chr7:33801261 1.18E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01214 - - zju:107432060 543.117