Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01216 ATGGTGAAAGCTAGAAGAAAGAGAAAGTCGATCAAGATAGACAGAATTGAAGCAGGCCTTAGAAGAGCTAGAGCTGCTATAGCAGCAGCTAAAAATGGAAACCAAACCCATGATCCTGATTACATCCCCGTCGGACCAATGTACAGGAATGCTAATGCATTTCACAGGAGCTATTTGGAAATGGAAAATGAGTTCAAGGTGTTTGTTTACGAAGAAGGGGAGCCGCCATTGTTCCACAACGGACCTTGCAAGAGCATATATTCAACTGAGGGGAACTTCATCAATGGAATTGAAGTGAATAATCAGTTCAGAACCAGAGATCCTGAAAAGGCTCATGCTTATTTCCTTCCCTTCAGCGTAGCCATGCTCGTTCAGTTTGTCTACGTCCGAGACTCCCGAGATTTCGGCCCCTTCAAGCACACCGTCACTGATTATATTGACGTCATCGGACGGAAATATCCCTTCTGGAACCGGAGCCTCGGAGCTGACCATTTCATGGTTTCTTGCCATGACTGGGGGCCAGAAGCTTCGTTTTCAGTGCCTAATCTGGGCAAAAACTCCATTAGAGTTCTCTGCAACGCCAACACTTCAGAAGGATTCAACCCCTTAAAGGACGTTTCCTTCCCGGAGATCAATCTTCAAACAGGGTCACTAAAGGGAATCATCGGAGGGCCTTCACCGTCCAGCCGCCCGCTCCTCGCTTTCTTCGCCGGCGGCCTTCACGGGCCCATCAGGCCCATTCTCATAAACCAGTGGGAGAACAAGGATGACGACATTGAAGTCCACCGATATCTTCCCAAAGGAGTTTCTTACTATGAAATGATGAGAAAGAGCAGATTTTGCATCTGCCCCAGTGGGTACGAGGTTGCCAGTCCCAGAATCGTAGAAGCTATTTACACCGGATGTGTCCCTGTTCTTATTTCCGACCACTATGTTCCTCCGTTCAGTGACGTTTTGAACTGGAAATCGTTCTCCGTTGAAGTTCCGGTGACGGAGATTCCAAATTTGAAGAAGATACTGATAGGTATTTCTAGCAGACAGTACATCAGAATGCAAAGGAGAGTTGAGAAAGTGAGGAGGCATTTTGAGGTAAATTCTCCTCCCAAGAGATTTGATATGTTCCACATGATTCTACATTCTGTGTGGCTTCGAAGGCTCAATCTCAGAGTTGACGAACAAGATGACGTTTAA 1191 46.52 MVKARRKRKSIKIDRIEAGLRRARAAIAAAKNGNQTHDPDYIPVGPMYRNANAFHRSYLEMENEFKVFVYEEGEPPLFHNGPCKSIYSTEGNFINGIEVNNQFRTRDPEKAHAYFLPFSVAMLVQFVYVRDSRDFGPFKHTVTDYIDVIGRKYPFWNRSLGADHFMVSCHDWGPEASFSVPNLGKNSIRVLCNANTSEGFNPLKDVSFPEINLQTGSLKGIIGGPSPSSRPLLAFFAGGLHGPIRPILINQWENKDDDIEVHRYLPKGVSYYEMMRKSRFCICPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVPVTEIPNLKKILIGISSRQYIRMQRRVEKVRRHFEVNSPPKRFDMFHMILHSVWLRRLNLRVDEQDDV 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45838212 45839655 - BLOR01216 Blo01g01216 55656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01216 396 PANTHER EXOSTOSIN FAMILY PROTEIN 4 391 - -
Blo01g01216 396 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 4 391 IPR004263 GO:0006486|GO:0016757
Blo01g01216 396 Pfam Exostosin family 62 340 IPR040911 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01216 Blo-Chr1:45838212 Blo01g01393 Blo-Chr1:52248760 3.50E-146 dispersed
Blo16g00315 Blo-Chr16:7968021 Blo01g01216 Blo-Chr1:45838212 5.73E-81 dispersed
Blo01g00615 Blo-Chr1:6787468 Blo01g01216 Blo-Chr1:45838212 4.18E-125 transposed
Blo01g01216 Blo-Chr1:45838212 Blo12g00503 Blo-Chr12:22901709 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01216 - - gmx:100806278 662.914