Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01217 ATGGAGGGCTTAGTCTTTACCCCTGCGCATTCTCATCTATTCCGACCGAAACCTATCGTTTCGGCCCCTCTTTCGTCCTTCCTTGGGACTCGCATTGTGTCCACTCCCGCCACCGCGAACAATGGCAGCACTAAACCGTTTATCGTTGCTACTCTTTCCAAATCGACGGCTGATATCTCTGCGAAGCCTGCGTCGACCACCAGCTTCGCTGCAAGGGAAGACACGGTGGCGGCGGCGCCTCCTTCACCTCCGAGGAAAAAAGTAGCGTCGGAATCTTTGCAATACACTGCCGGTTACCTAGGGGCGGTGCCTGACCGTTTGGTTCAAGGTAAAGGTGATAATTACGTCAATGCCATGGGGTACTTGACTAATATTCTATGTTCGAAGGTGTACGATGTTGCTATTGAATCACCGTTGCAGCTCGCCCCCAAGCTTTCGGAACGCTTAGGGGTGGAGGTTTGGCTCAAGCGGGAGGACTTGCAGCCTGTATTCTCGTTTAAGCTTCGTGGAGCTTATAATATGATGGCAAAGCTTCCAAAAGAAAAGTTAGAAAGAGGGGTAATTTGTTCATCTGCTGGAAATCATGCTCAAGGGGTGGCATTAGCTGCAAAGAGGCTAGGTTGTGATGCAGTGATTGCTATGCCAATGACTACTCCGGATATCAAATGGAAATCCGTGGAAAGATTGGGAGCCACTGTTGTTCTTGTCGGGGATTCATATGACGAAGCGCAAACCTATGCTAAAAAGCAAGGAGAAGAGGAAGGTCGGACATTCATACCTCCTTTCGATCACCCGGATGTCATCATGGGGCAAGGAACAGTCGGGATGGAAATTGTGCGGCAAATGAATGGCCCTTTGCATGCAATATTTGTGCCTGTTGGGGGAGGTGGACTTATAGCTGGCATTGCTGCATATGTGAAGAGAGTTTCTCCTGAGGTTAAGGTTATTGGTGTGGAGCCATGTGATGCAAATGCTATGGCTTTGTCTCTACATCATGGTCAGAGAGTGATTTTGGATCAGGTTGGAGGTTTTGCAGATGGTGTTGCAGTTAAGGAGGTTGGAGAAGAACCATTTCGCTTGTGCAGAGAACTGGTGGATGGTGTAGTTCTTGTAGGCAGGGATGCTATCTGTGCTTCAATAAAGGACATGTTTGAAGAGAAGAGGAGCATCTTAGAACCTGCAGGTGCTCTTTCTCTTGCTGGAGCTGAAGCTTACTGTAAATATTATGGCTTGAAGGGAGAAAGCGTAGTTGCCATAACCAGTGGTGCAAATATGAACTTTGATAAACTCAGGTTGGTGACTGAACTGGCTAATGTCGGTCGTCAACAAGAGGCTGTGCTTGCAACCATTATGCCAGAGAAGCCTGGGAGCTTCAAACAATTTTGTGAGCTGGTGGGACCCATGAATATCACTGAATTCAAATATAGGTGTAATTCCGACAAAGAGGCTGTCGTTCTTTACAGTGTTGGGGTCCATACAGTTTCTGAACTTGAAGCAATGAAAAATAGGATGGAATCTTCTCAACTTAAAACTTTTAATCTCACACAAAGTGACTTGGTTAAAGATCATTTACGTTACCTGATGGGAGGCAGGTCAAGTGTTCAAAATGAGGTGCTTTGTAGATTTATCTTCCCAGAGAGACCTGGCGCTCTGATGAAATTTTTGGAGGCATTCAGTCCGCGTTGGAATATTAGTTTATTCCATTACCGTGGACAGGGTGAAACTGGTGCAAATGTACTAGTCGGACTTCAAGTTGCAAAGACTGAGGTGGATGAATTCCACCTTCGTGCCAACAATCTTGCATACGATTATGCAATGGTAATAATGATCATCCCCATGAAACAGGTACAATTTAATCTCGATTGCTTCGTAAAAGAGCATCAGTTCAAGTCATCATCATCTGCACAGATGAGGAAAAGCAGAGTGAAGGGGCCATTAACATCCATTCCTCCAAACGGCAGGAAGAATGGGTCCTCCACTTTCCAACGCTGGCTGGAAGTTAATGTTAAGGGAAATGGCTCACAGAGAGAAGGAGACCCTCTTGTTCCAGCTTTATTCATCTTCGGGGACTCTGTGGTCGATGTCGGAAATAACAACTATTTGCCTACGCTTATCAAGGCAAACTTTCTTCCTTATGGTAGAGACTTCGTTTCTCACCAACCAACTGGAAGGTTCTGCAATGGGAAGCTGGCCACGGACTTCACTGCGGAATATCTGGGTTTCACATCATACCCACCAGCCTACCTTAGTCGGGAAGCCGCCGGGGAAGCCCTCTTAACCGGAGTCAACTTTGCCTCTGCTGCCTCTGGCTACTATGAAGGCACTGCCCGGTTATATCAATCACTTCCACTGAGCCGGCAGTTGAACAACTACAAGCAATACCAGAACGAAGTGGTGAATATGGTAGGAAGAAGCAAAGCCAACGCTATATTTTCTGATGCAATTTATCTTCTCAGCGCTGGAAGCAGTGATTTCATTCAGAATTACTATATCAACCCATTGCTTAGAGGGAACTACTCGCCTGATAAGTTTTCTGAACTTCTAATCACATCCTTCTCCGATTTCATTCAGGACTTATATGATGTTGGAGCAAGAAGAATAGGGGTGACTAGTTTACCGCCAACGGGGTGTTTACCGGCAGCCATTACACTTTTTGGCCGAGGAAGGAACAGTTGCGTAGAAAGGTTAAACCAAGACGCCATCTCATTCAACAATAAGCTAAACGACACCTCTCAGAGCTTGAAGACCAGATTTGCCGACCTTAAACTTGTAGTCTTCGACATTTACAACCCGCTCTTAGACATGATCAAAATGCCTTCTGATTTTGGGCTCTTCGAGTCAAGAAGGGCATGTTGTGGGACAGGAATCTTAGAAACTTCCATTCTCTGCAACAGACGATCAATAGGGACATGTTCAAATGCTACAGGCTATGTTTTCTGGGACGGAGTTCATCCATCTGCAGCTGCTAATGAAGTCTTGGCTGGTTATCTTCTTGCTCAGGGATTTGACCTAATCTCTTAA 3021 46.01 MEGLVFTPAHSHLFRPKPIVSAPLSSFLGTRIVSTPATANNGSTKPFIVATLSKSTADISAKPASTTSFAAREDTVAAAPPSPPRKKVASESLQYTAGYLGAVPDRLVQGKGDNYVNAMGYLTNILCSKVYDVAIESPLQLAPKLSERLGVEVWLKREDLQPVFSFKLRGAYNMMAKLPKEKLERGVICSSAGNHAQGVALAAKRLGCDAVIAMPMTTPDIKWKSVERLGATVVLVGDSYDEAQTYAKKQGEEEGRTFIPPFDHPDVIMGQGTVGMEIVRQMNGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKVIGVEPCDANAMALSLHHGQRVILDQVGGFADGVAVKEVGEEPFRLCRELVDGVVLVGRDAICASIKDMFEEKRSILEPAGALSLAGAEAYCKYYGLKGESVVAITSGANMNFDKLRLVTELANVGRQQEAVLATIMPEKPGSFKQFCELVGPMNITEFKYRCNSDKEAVVLYSVGVHTVSELEAMKNRMESSQLKTFNLTQSDLVKDHLRYLMGGRSSVQNEVLCRFIFPERPGALMKFLEAFSPRWNISLFHYRGQGETGANVLVGLQVAKTEVDEFHLRANNLAYDYAMVIMIIPMKQVQFNLDCFVKEHQFKSSSSAQMRKSRVKGPLTSIPPNGRKNGSSTFQRWLEVNVKGNGSQREGDPLVPALFIFGDSVVDVGNNNYLPTLIKANFLPYGRDFVSHQPTGRFCNGKLATDFTAEYLGFTSYPPAYLSREAAGEALLTGVNFASAASGYYEGTARLYQSLPLSRQLNNYKQYQNEVVNMVGRSKANAIFSDAIYLLSAGSSDFIQNYYINPLLRGNYSPDKFSELLITSFSDFIQDLYDVGARRIGVTSLPPTGCLPAAITLFGRGRNSCVERLNQDAISFNNKLNDTSQSLKTRFADLKLVVFDIYNPLLDMIKMPSDFGLFESRRACCGTGILETSILCNRRSIGTCSNATGYVFWDGVHPSAAANEVLAGYLLAQGFDLIS 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45923823 45934153 - BLOR01217 Blo01g01217 55657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01217 1006 CDD ACT_ThrD-I_2 537 604 - -
Blo01g01217 1006 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 158 171 IPR000634 GO:0006520|GO:0030170
Blo01g01217 1006 Gene3D - 170 261 IPR036052 -
Blo01g01217 1006 Pfam GDSL-like Lipase/Acylhydrolase 685 995 IPR001087 GO:0016788
Blo01g01217 1006 SUPERFAMILY ACT-like 525 604 IPR045865 -
Blo01g01217 1006 PANTHER THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED 71 613 - -
Blo01g01217 1006 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 128 472 IPR036052 -
Blo01g01217 1006 CDD Thr-dehyd 132 426 - -
Blo01g01217 1006 ProSiteProfiles ACT-like domain profile. 538 609 IPR001721 -
Blo01g01217 1006 TIGRFAM ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 121 605 IPR005787 GO:0004794|GO:0009097
Blo01g01217 1006 Gene3D SGNH hydrolase 675 1001 IPR036514 -
Blo01g01217 1006 Gene3D - 138 416 IPR036052 -
Blo01g01217 1006 CDD SGNH_plant_lipase_like 683 998 IPR035669 -
Blo01g01217 1006 ProSiteProfiles ACT-like domain profile. 445 516 IPR001721 -
Blo01g01217 1006 CDD ACT_ThrD-I_1 444 527 - -
Blo01g01217 1006 PANTHER THREONINE DEHYDRATASE 71 613 - -
Blo01g01217 1006 SUPERFAMILY SGNH hydrolase 685 998 - -
Blo01g01217 1006 Pfam Pyridoxal-phosphate dependent enzyme 133 422 IPR001926 -
Blo01g01217 1006 Pfam C-terminal regulatory domain of Threonine dehydratase 531 605 IPR001721 -
Blo01g01217 1006 Pfam C-terminal regulatory domain of Threonine dehydratase 435 524 IPR001721 -
Blo01g01217 1006 Gene3D Biosynthetic Threonine Deaminase; Domain 3 444 608 IPR038110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01217 Blo-Chr1:45923823 Blo03g01304 Blo-Chr3:39376714 1.57E-173 dispersed
Blo03g00210 Blo-Chr3:4858742 Blo01g01217 Blo-Chr1:45923823 5.58E-34 dispersed
Blo11g00284 Blo-Chr11:2292307 Blo01g01217 Blo-Chr1:45923823 2.60E-71 dispersed
Blo01g01217 Blo-Chr1:45923823 Blo07g01369 Blo-Chr7:33832648 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01217 K01754 - qsu:111997153 941.799