Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01233 ATGCCGAGAAAGACTTCGTCAGAGAAGGCAAACTCGTCGATGGACCAGCTCGAAAGGCTTGTCGCGCTGGAAGAGGAGATGACATATCTCCAAGAAATCCCTGATAATGTGCGTTTCCTAGAGGAACGAATGAAGGAAATGGCTGAATTTCCTTGTGATTTGAAGTGTATTTGTGAGACAGATCTCGGTCTTGTTTCACAATGTTGTTTGACAAAGCATGTTTATAAAATGAGCAAGCAATATTTAGCTAATGTTGCTTTGAAGATTAATGTGAATGTTGGGGGAAGAAACACTGTGCTCGTTGATGCAATATCAAGGCAGATACCTTTGGTTAACGACAGACGTACTATCATTTTTGGTGCTGATGTTACTCATCCTCACCCATGGGAGGATTCTAGCCCCTCTATCGCTGCTGCGCACCGACAAGAGCTCGTCCAAGATCTGTTTAAAAAATGGCAGGATCCTGTGAGGGGAACAGCATCTGGAGGAATGATCAAGGAATTAGGGAACGCCTCATATCATTCCAAAGAGCAACTGGACAGAAACCTCAACGAATAA 558 43.73 MPRKTSSEKANSSMDQLERLVALEEEMTYLQEIPDNVRFLEERMKEMAEFPCDLKCICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVNVGGRNTVLVDAISRQIPLVNDRRTIIFGADVTHPHPWEDSSPSIAAAHRQELVQDLFKKWQDPVRGTASGGMIKELGNASYHSKEQLDRNLNE 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 46585136 46592972 - BLOR01233 Blo01g01233 55673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01233 185 SUPERFAMILY Ribonuclease H-like 51 149 IPR012337 -
Blo01g01233 185 Coils Coil 7 27 - -
Blo01g01233 185 Pfam Piwi domain 53 139 IPR003165 GO:0003676
Blo01g01233 185 ProSiteProfiles Piwi domain profile. 35 138 IPR003165 GO:0003676
Blo01g01233 185 Gene3D - 107 183 IPR036397 GO:0003676
Blo01g01233 185 Gene3D - 4 105 - -
Blo01g01233 185 PANTHER PROTEIN ARGONAUTE 1A 52 168 - -
Blo01g01233 185 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 52 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01233 Blo-Chr1:46585136 Blo13g00109 Blo-Chr13:2042432 1.48E-61 dispersed
Blo01g01233 Blo-Chr1:46585136 Blo07g00235 Blo-Chr7:2953226 8.06E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01233 K11593 - tcc:18604506 203.756