Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01242 ATGGAAATCCTGAGCGAAAGAGCAGCGTTTATTAGAGACTCGCTGCAAAAGAGCCAAACTATCACCAATAACATGGTCGACATTCTTGGCTCCTTCGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGTCCCACTCAGATAAGAACCCACTCAATCCGGAAGGCTCATGAGAATATTGATAAGACGGTCAAGGCTGCAGAGGTTATATTGGCGCAGTTCGACTTGTCTCGCAAGGCAGAGGCTAAAATATTAAGAGGGCCGCATGAGGACCTTGAAAGTTACTTGGAAGCCATTGACCAATTGAGAAGCATTATTCGCTTTTTTGGTGGCAATAAAAATTTTAAGAGTAGTGATTCAGTGCTTAACCACACAAACAACTTGCTTGCAAAAGCCATTTCTAAGCTTGAAGATGAATTCAGGCAGCTACTGACGAACTACAGTAAGCCGGTTGAACCTGATCGCCTATTTGATTGCCTTCCCAACTCTCTACGCCCATCATCAGAAACACCCGGGCAACAAAGCAATGCTACTAGCAAGTGTAGTTCTATGCACCAAAGCAAAAGATTGGAAACTGCTGTGTACACACCTCTGTCCTTAATTCCTAATAGAGTTGTGCCGCTATTGCATGATTTAGCCCAGCAAATGGTTCAGGCTGGCCATCAACAACAGCTGCTGAGGATATACAGGGATACTCGTGCTTCGGTTTTGGAACAAAGTCTCAGAAAACTAGGCGTGGAGAGACTTAGTAAAGACGACGTCCAGAAAATGCAGTGGGAGGCTTTGGAGGCTAAGATTGGGAATTGGATTCATCACATGCGTATTGCGGTCAAGCTGTTGTTTTCAGGGGAAAGAAAAATATGCGATCAAATATTTGAGGGTGTTGATTCTCTCAGGGATCAATGCTTTGCGGAAGTGACTGCAAACAGTGTGGCTGTGTTGCTAAGTTTCGGAGAGGCAATTGCGAAAAGCAAGAGATCGCCAGAAAAACTATTTGTTCTCTTAGACATGTATGAGATAATGAGGGAAGTACAATCAGAGATTGAAACACTATTTGGAAACAAAGCAAGCCTTGAAATGAGGGAGGCTGCATTGAGTTTGACAAAGCGTCTGGCTCAGACAGCCCAGGAAACTTTCGCTGACTTTGAAGAAGCAGTAGAAAAGGATGCAACAAAAACTGCTATTCTTGATGGAACTGTCCATCCCTTGACCAGCTACGTGATAAACTATGTTAAATTTTTATTCGATTATCAGTCCACTTTGAAGCTACTTTTTGAAGACTTCGATAATAGTGATCCAGATGTTCAGTTAGCAAAGGTAACTACAAGGATTATGCTTGGTCTTCTTAATAATCTGGATGCGAAATCTAAGCAGTATAAAGATCAGGCATTGACTCAATTATTTCTCATGAACAACATTCACTATATAGTGAGATCTGTGAGAAGGTCTGAGGCAAAGGATGTGTTGGGAGATGATTGGGTACAAATACACCGAAGAATTGTCCAACAACATGCTAATCAGTATAAGAGAGTTTCATGGGCAAAGATTTTGCAGTGCCTCACTATTCAGGGCCTAAATCAGTCAGGCGGAGGCGATGCGGGCAGCAGTGGACTTTCAAGAGCAATGGTGAAAGAAAGGTTTAAGACATTTAATATTCAATTCGAAGAGCTTCATCAAAGACAATCTCAGTGGACAGTTCCTGATAGCGAGTTGCGTGAATCGTTGAGGCTGGCCGTTGCTGAAGTCCTCTTGCCTGCATACAGATCGTTCGTCAAACGTTTCGGGCCAATGATCGAGAATGGGAAAAATCCCCAGAAATACATCAGATATTCTCCTGAGAATCTGGAACGGATGTTGAATGACTTTTTTGAGGCAAAGAAATTGGCGTTCAAGCGTGGGAAGGCAACGGTGGAAGGTGTGCAAGCCGCTGCGGTGGATGATGAGCAACTCGCGGCGGTGGTCGATGAGCAACCTGCGGCTATGCAACACGAAGACACCGCCGAGGATGGAGAAACCGTTGCACACTTGCAAAGGCAAGCTGAACCCGAGCTTTAA 2055 44.48 MEILSERAAFIRDSLQKSQTITNNMVDILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTVKAAEVILAQFDLSRKAEAKILRGPHEDLESYLEAIDQLRSIIRFFGGNKNFKSSDSVLNHTNNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSETPGQQSNATSKCSSMHQSKRLETAVYTPLSLIPNRVVPLLHDLAQQMVQAGHQQQLLRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHHMRIAVKLLFSGERKICDQIFEGVDSLRDQCFAEVTANSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMREVQSEIETLFGNKASLEMREAALSLTKRLAQTAQETFADFEEAVEKDATKTAILDGTVHPLTSYVINYVKFLFDYQSTLKLLFEDFDNSDPDVQLAKVTTRIMLGLLNNLDAKSKQYKDQALTQLFLMNNIHYIVRSVRRSEAKDVLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLTIQGLNQSGGGDAGSSGLSRAMVKERFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPMIENGKNPQKYIRYSPENLERMLNDFFEAKKLAFKRGKATVEGVQAAAVDDEQLAAVVDEQPAAMQHEDTAEDGETVAHLQRQAEPEL 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 47138045 47143631 + BLOR01242 Blo01g01242 55682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01242 684 MobiDBLite consensus disorder prediction 159 184 - -
Blo01g01242 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 629 IPR004140 GO:0000145|GO:0006887
Blo01g01242 684 Coils Coil 341 361 - -
Blo01g01242 684 Pfam Exo70 exocyst complex subunit 268 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Blo01g01242 684 Coils Coil 126 146 - -
Blo01g01242 684 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 30 629 - -
Blo01g01242 684 SUPERFAMILY Cullin repeat-like 70 624 IPR016159 -
Blo01g01242 684 MobiDBLite consensus disorder prediction 661 684 - -
Blo01g01242 684 MobiDBLite consensus disorder prediction 163 184 - -
Blo01g01242 684 Gene3D Exocyst complex component Exo70 68 632 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01242 Blo-Chr1:47138045 Blo13g00674 Blo-Chr13:29476600 0 dispersed
Blo01g01340 Blo-Chr1:51014878 Blo01g01242 Blo-Chr1:47138045 7.40E-66 dispersed
Blo12g01102 Blo-Chr12:28707243 Blo01g01242 Blo-Chr1:47138045 1.99E-69 dispersed
Blo13g00222 Blo-Chr13:9402270 Blo01g01242 Blo-Chr1:47138045 2.77E-24 dispersed
Blo01g01242 Blo-Chr1:47138045 Blo06g00756 Blo-Chr6:30796856 2.34E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01242 K07195 - twl:119990264 1043.11