Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01247 ATGGCGACGTACTTCCATGGAAACTCCGAAATCCATCCGCCTGACGGATTGCAAACCCTAATCCTGATGAATCCCGGCTACATCCAGTACTCCGACACACCCCCACCGGCCTCTAGCAACCTAGTATTCTTCAACTCTCCTGTCGGAAATCCCCTCCATTCGCCCAATCTGCCTCACGCGCCGCTATCCCGACCTCAGCACTTGGTTGGCATCCCTCTTTCCGCCGCCACCTCTCCAGACCCGAACTCTCTTTCCTCGCACAGCCACCATGATGTTTCTCCCTTGCATGGTTTCATCCAACGCTCGAAAAATAGGTTTTGGAGCTCAAATGATCATCCCTCGACGGGGGCGCGTGACACTCCACGCCCTAGGCAATCACTGTCCCTTACCCTCTCATCTCATCAGCCAGGGTATGGATTAGTCGGAATTCCATCTGAAGCTCAACAGGAAGTTTCCGGCGAGGATGTGCTCATTGCAGGTGGATCCTCCTCCGCTTCCGGCGTTACACTTCCGCCATTGCGGAGCATATCACTGAGCTCGAAGTACTTAAGAGCTGCTCAGGAGCTTCTTGATGAGATGGCAAACGTCGGCAATAATGGGGTTAAGAAAGAGACCTTGAAGAAGACCGATGACCGACGGACTAAGCAGGAGGAAGAGTCATTGGCACTCGCCAGAGACAAAACGGATGGAGTGGAAAGCACAGCGAAGACCAGTCCAGAGCTTTCCGACGCCGAGAGGCAAGAAATTCAGATGAAGAAGGCCCAGTTTATTAACATGCTTGATGAGGTGGAGCAAAGATACGGACAGTATCATCATCAAATGCAGATTTTGGTTTCCTCTTTCGAACAAGCAGTTGGAATAGGCTCTGCAAGAACTTACACAGCCCTCCCGCTTCAGACCATCTCGAAGCAATTCAGATGCTTAAAAGACACAATCACTGCCAAAATTCGAGTGGCGAACAAGAACTTAGGCAAAGAGGACTGCCATGTCGGCCAACTCAAAGGGTCGAAACTTAGATTTGCAGGCCATCACTTTCATCAGCAGGCTCTACAGAACTTGGGAATGATCCAACACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAGAGATCGGTTTCTGTTCTTCGAGCCTGGCTATTCGAACACTTTCTTCATCCGTATCCAAAAGATTCAGACAAGCACATGCTGGCGAAACAGACAGGTCTCACGAGAAGTCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGTCTGTGGAAGCCGATGGTAGAAGACATGTACATGGAAGAAATCAAGGAGCAAGAACAGAACTTATCAGCAGACAAAATCAGCAAGAACAATGACAATACGACTTCCAAATCCACAACACCAATTCCACAAGACAAAAATTATGCATCTGACAACCAGCTTCCCAAACTTGATGGAATCACACAAGGAAGTCTAAAGAGACAACGGATTGCTGAACTGATGCAGTCCCCAAACAGTATTCCTATAAACATTGACACTAAGCCAGGGGAAGTTAATAATGAGCACATTTCAATGAAGTTTAACAGTGAGAGGCGTAGCAGAGAAGGCTATTCTTTCATTGGATGTCAAGATAATTTCATTGGAGGTTTCGAGCAATACCCAATTACAGATATTGAAAGGTTTGACGCTGAGCCATTGACAACAGGTTTCCCCGGCAATGCTGTTTCTCTCACTCTTGGTCTTCCCCATTCTGAAAATCTCACGTTATCGGTAGCCAATCATACTTTCCTTCCAAATCAAAATATAAATTTTGGAAGAAACAGTTTTGACGCAATCGACATATCAACACCACACTCAACATCTGCATTTGGCAACATCGATGCACAAAACCAAAAACGATTTGAGGCGCAATTGTTGCCTGACTTTGTGACCTGA 1902 47.11 MATYFHGNSEIHPPDGLQTLILMNPGYIQYSDTPPPASSNLVFFNSPVGNPLHSPNLPHAPLSRPQHLVGIPLSAATSPDPNSLSSHSHHDVSPLHGFIQRSKNRFWSSNDHPSTGARDTPRPRQSLSLTLSSHQPGYGLVGIPSEAQQEVSGEDVLIAGGSSSASGVTLPPLRSISLSSKYLRAAQELLDEMANVGNNGVKKETLKKTDDRRTKQEEESLALARDKTDGVESTAKTSPELSDAERQEIQMKKAQFINMLDEVEQRYGQYHHQMQILVSSFEQAVGIGSARTYTALPLQTISKQFRCLKDTITAKIRVANKNLGKEDCHVGQLKGSKLRFAGHHFHQQALQNLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEDMYMEEIKEQEQNLSADKISKNNDNTTSKSTTPIPQDKNYASDNQLPKLDGITQGSLKRQRIAELMQSPNSIPINIDTKPGEVNNEHISMKFNSERRSREGYSFIGCQDNFIGGFEQYPITDIERFDAEPLTTGFPGNAVSLTLGLPHSENLTLSVANHTFLPNQNINFGRNSFDAIDISTPHSTSAFGNIDAQNQKRFEAQLLPDFVT 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 47397235 47399615 + BLOR01247 Blo01g01247 55687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01247 633 Coils Coil 246 266 - -
Blo01g01247 633 SMART HOX_1 361 425 IPR001356 GO:0003677
Blo01g01247 633 Pfam Homeobox KN domain 378 417 IPR008422 GO:0003677|GO:0006355
Blo01g01247 633 CDD homeodomain 361 422 IPR001356 GO:0003677
Blo01g01247 633 SUPERFAMILY Homeodomain-like 362 428 IPR009057 -
Blo01g01247 633 MobiDBLite consensus disorder prediction 74 133 - -
Blo01g01247 633 ProSiteProfiles 'Homeobox' domain profile. 358 421 IPR001356 GO:0003677
Blo01g01247 633 MobiDBLite consensus disorder prediction 438 474 - -
Blo01g01247 633 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 597 - -
Blo01g01247 633 MobiDBLite consensus disorder prediction 203 244 - -
Blo01g01247 633 MobiDBLite consensus disorder prediction 76 90 - -
Blo01g01247 633 MobiDBLite consensus disorder prediction 102 133 - -
Blo01g01247 633 MobiDBLite consensus disorder prediction 202 244 - -
Blo01g01247 633 MobiDBLite consensus disorder prediction 440 474 - -
Blo01g01247 633 Gene3D - 364 443 - -
Blo01g01247 633 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 597 - -
Blo01g01247 633 Pfam Associated with HOX 178 313 IPR006563 -
Blo01g01247 633 SMART prehox3 171 314 IPR006563 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01247 Blo07g01167 CCT
Blo01g01247 Blo09g00467 CCT
Blo01g01247 Blo12g00539 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01247 Blo-Chr1:47397235 Blo01g01577 Blo-Chr1:55576788 2.11E-81 dispersed
Blo01g01247 Blo-Chr1:47397235 Blo12g00539 Blo-Chr12:23334895 0 wgd
Blo01g01247 Blo-Chr1:47397235 Blo09g00467 Blo-Chr9:15843844 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11902 PF07526 POX 1.80E-43 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01247 - - zju:107405648 744.191