Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01297 ATGGAGGTAAAAGGCCAAGCTTTGGGCAATATCCAAGGGCAGGAAGAAGAAGAGGAAGAAGAAAAGGAGGAGAAGCATTTTCATGTGCTGGCGGTGGATGATAGTGTTTTAGACATGAAGATTTTGGAGAGACTCCTCAGAATTTCCTCATACAAAGCAGTTACATGCGTTGAATCTGGGGATAAAGCTCTCAAGTATTTGGGTCTGCTCGATAATTTAGAAACCCCTTCTCCTTCTTCTGCTGCTGCTGCGCTGTCTTCTTCCCCACAATTATCAAATGTGGAGGGATTAAAAGTCAATTTGATCATGACGGACTACTGTATGCCCGGAATGAACGGCTATGATCTACTCATGCGAATCAAGGGATCGAGTTGGAAGGACGTTCCAGTCGTAGTGATGTCATCGGAGAACGTACCTTCAATAGTCACCATGTGCTTGGAAGGAGGGGCGGAGGAATTTCTGCTCAAGCCTCTCCAACGTTCAGACTTGGAGAAGCTTCACCCCTATCTCTTGAAGTCTCTAAATCAGCCGCCTCCGCCTCCGCCACCAGCCGGCAATGACAACACAGTGGCCGTGAAGAGCGTCAACATCGTTAGTAAACGAAAGACCATGTCTCCGAAGCCCTCTGAGCCTGATAGAAGACCCAAAATGAAAGAACTGGCTGTTGTTTAG 672 47.32 MEVKGQALGNIQGQEEEEEEEKEEKHFHVLAVDDSVLDMKILERLLRISSYKAVTCVESGDKALKYLGLLDNLETPSPSSAAAALSSSPQLSNVEGLKVNLIMTDYCMPGMNGYDLLMRIKGSSWKDVPVVVMSSENVPSIVTMCLEGGAEEFLLKPLQRSDLEKLHPYLLKSLNQPPPPPPPAGNDNTVAVKSVNIVSKRKTMSPKPSEPDRRPKMKELAVV 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49779173 49780342 + BLOR01297 Blo01g01297 55737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01297 223 MobiDBLite consensus disorder prediction 171 223 - -
Blo01g01297 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 222 IPR045279 GO:0009736
Blo01g01297 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 11 222 - -
Blo01g01297 223 MobiDBLite consensus disorder prediction 205 223 - -
Blo01g01297 223 Gene3D - 11 174 - -
Blo01g01297 223 MobiDBLite consensus disorder prediction 1 24 - -
Blo01g01297 223 ProSiteProfiles Response regulatory domain profile. 28 171 IPR001789 GO:0000160
Blo01g01297 223 Pfam Response regulator receiver domain 29 165 IPR001789 GO:0000160
Blo01g01297 223 MobiDBLite consensus disorder prediction 189 203 - -
Blo01g01297 223 SUPERFAMILY CheY-like 27 171 IPR011006 -
Blo01g01297 223 SMART REC_2 27 167 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01297 Blo-Chr1:49779173 Blo16g00206 Blo-Chr16:4630507 6.18E-44 dispersed
Blo01g01297 Blo-Chr1:49779173 Blo09g00375 Blo-Chr9:14523871 1.99E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11906 PF00072 Response_reg 8.90E-18 CL0304 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01297 K14492 - rcu:8281066 248.825