Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01301 ATGGACAAGTGGAAGGGAATGCTTTGGTGTTGGTGTGTTGTTGCGTTATTAGTATTTGCAGGGTTTAAGAGAATTGAAGGAGGAGGCAACGGAAACGTTACTTATGATGGAAGATCTCTGATCATCAATGGCCGCCATACAATTCTTTTCTCTGCTTCAATTCATTATCCCAGAAGCACCCCTGATATGTGGCCATCTTTGATAGCCAAGGCCAAAAAGGGCGGAGTTGATGTAATCCAAACGTACGTGTTTTGGAATCTTCATGAGCCCCAGCAAGGACAGTTTGACTTCAGCGGAAGACGAGACTTAGTGCGGTTCATCAAGGAAATTCAGGCTCAAGGCTTGTATGCAACCCTCAGAATTGGTCCATTCATCGAGGCTGAATGGAGTCATGGGGGTTTACCGGTTTGGCTGCGCGGCATTCCAAACATCGTCTTCCGGTCGGATAATGAACCGTTCAAGAATCAAATGGAGAAGTTTACGGCGAAGATAGTGAACATGATGAAGGAAGAAAATCTGTATGCTTCACAGGGAGGACCTATTATACTTTCGCAGATTGAGAATGAGTACACGCTTGTAGAGCCAGCCTTCCACGAGAAAGGCCCTCCTTACGTCCGATGGGCCGCAAACATGTCCGTCAGCCTTCAGACCGGTGTGCCGTGGCTTATGTGCCGCCAAGACGATGCTCCGGACCCTGTGATCAATGCGTGCAATGGAATGAGATGCGGACAAACCTTTGCAGGACCTAATTCACCGAACAAACCATCGATCTGGACGGAGAACTGGACTAGTTTCTATCAATTATTTGGTGAAGAACCCTACATGAGATCAGCAGAAGACATTGCGTTTCAAGTCGCTCTTTTTATTGCAAAGAATGGAAGCTATGTAAACTACTACATGTACCATGGAGGAACCAACTTTGGAAGAACCGGCTCGGCATTCGTGACGACAAGCTATTACGATCAAGCTGCCCTCGACGAATATGGCTTAATAAGGCAGCCAAAGTGGGGTCATCTGAAGGAATTACATGCTGCTGTGAAGTTATGCAGCAAAGCATTGTTGTCTGGGACTCAGACAACAGTTCCACTCGGCAAACTACAAGATGCGTACGAGTTTCGAGATAAATCTGGAGATTGTGCTGCCTTTTTGGTGAACAACGAAAACAAAGACGTTCATATTCCCTTTCGAAACAACAAGTATGATTTGCCGAAAGAGTCGATTAGCATTCTACCGGACTGCAAAACGGTAGCATTCAACACAGCAAAGGTGAGCGCACAACACGGAACACGATCGGTCACATCGAGCCGGAAGTTGAATTCAGAAGCAGAGTGGCGAGAATTCAATGAGATCATACCCAGTTATGAACAAACTTCAATAAGAGCAAACACCTTATTAGAGCAAGTTAACATGACAAAAGACAAGTCTGATTTTCTTTGGTACACCTTCAGATATCATCATGATTCGCCGGAGACCCGACTGAAACTTGACGTGTCTTCCCGGAGCCATGCTCTGCTTGCCTATGTTAATGGAGCTTTCGCAGGCAAGCTACTCATCTCTACTCAATCAAATCTTTTTTCGCTTCAGGAAAATATTAATCTGAGAAACGGGGCCAATGACATCTCGTTATTGAGCGTAATGACTGGATTACCGGACGGAGGAGCATATCTAGAGCGCAGAGTGGCCGGATTGCGCCGCGTGAGGATTGAAGGAAAAGATTTGTCGCGCTCTGGAATGGGTTATCAGGTTGGATTGGTAGGGGAGCATTTAGAAGTATATAAAGGCAATGGATCAAGTGAAGTTGGGTGGAATCAGCTGGGAAGCTCCCATCAACAACCTCTAACCTGGTATAAGATTTCATTTGATGCGCCGCCCGGGAATGACCCTGTGGCGGTGAACCTCGGCAGCATGGGGAAGGGTGAAACTTGGGTGAACGGCGAAAGCATCGGCAAATATTGGGTCTCCTTCCTCACTCCTAAAGGGAATCCTTCGCAGACATGGTATCATATTCCACGATCCTTCCTCAAGCCCAGAGGCAATCTACTATTTCTTCTGGAAGAAAATGGAAAAGGAAACCCACTTGAGGTTTCGATCGACACCATTTCCATCACCAAAGTCTGCGGGAAAGTGTCCGATTCACATTACCCACCAGTTTCTTCGTGGGTGGGTCACTACGTTCACGGAGCAAGGCTCAGACACAAACACGGAAGACGTCCGAGAGTTCAACTGCTGTGTCCTCCGACGAAGAAAATCTCCAAAATTTTATTCGCGAGCTTCGGAAACCCCGCCGGCAACTGTGAAAAGTACGCCGCCGGACATTGCCACTCCTCGAAATCTAGAGCCGTTGTCGAGAAGGCTTGTCTGGGGAAGGCAAAATGCACCGTTCCGCTGTCGACAAAAATGTTCGGCGGGGACCCGTGTCCGGGGACGTCGAAATCTCTCATGGTTGATGCACAATGCGCATAG 2463 47.46 MDKWKGMLWCWCVVALLVFAGFKRIEGGGNGNVTYDGRSLIINGRHTILFSASIHYPRSTPDMWPSLIAKAKKGGVDVIQTYVFWNLHEPQQGQFDFSGRRDLVRFIKEIQAQGLYATLRIGPFIEAEWSHGGLPVWLRGIPNIVFRSDNEPFKNQMEKFTAKIVNMMKEENLYASQGGPIILSQIENEYTLVEPAFHEKGPPYVRWAANMSVSLQTGVPWLMCRQDDAPDPVINACNGMRCGQTFAGPNSPNKPSIWTENWTSFYQLFGEEPYMRSAEDIAFQVALFIAKNGSYVNYYMYHGGTNFGRTGSAFVTTSYYDQAALDEYGLIRQPKWGHLKELHAAVKLCSKALLSGTQTTVPLGKLQDAYEFRDKSGDCAAFLVNNENKDVHIPFRNNKYDLPKESISILPDCKTVAFNTAKVSAQHGTRSVTSSRKLNSEAEWREFNEIIPSYEQTSIRANTLLEQVNMTKDKSDFLWYTFRYHHDSPETRLKLDVSSRSHALLAYVNGAFAGKLLISTQSNLFSLQENINLRNGANDISLLSVMTGLPDGGAYLERRVAGLRRVRIEGKDLSRSGMGYQVGLVGEHLEVYKGNGSSEVGWNQLGSSHQQPLTWYKISFDAPPGNDPVAVNLGSMGKGETWVNGESIGKYWVSFLTPKGNPSQTWYHIPRSFLKPRGNLLFLLEENGKGNPLEVSIDTISITKVCGKVSDSHYPPVSSWVGHYVHGARLRHKHGRRPRVQLLCPPTKKISKILFASFGNPAGNCEKYAAGHCHSSKSRAVVEKACLGKAKCTVPLSTKMFGGDPCPGTSKSLMVDAQCA 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49842744 49847066 + BLOR01301 Blo01g01301 55741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01301 820 Gene3D - 733 820 IPR043159 -
Blo01g01301 820 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Blo01g01301 820 Pfam Glycosyl hydrolases family 35 39 345 IPR031330 -
Blo01g01301 820 PANTHER BETA-GALACTOSIDASE 13 812 - -
Blo01g01301 820 Gene3D Glycosidases 29 349 - -
Blo01g01301 820 ProSiteProfiles SUEL-type lectin domain profile. 737 820 IPR000922 GO:0030246
Blo01g01301 820 PANTHER BETA-GALACTOSIDASE RELATED 13 812 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 SUPERFAMILY Galactose-binding domain-like 407 565 IPR008979 -
Blo01g01301 820 SUPERFAMILY (Trans)glycosidases 32 349 IPR017853 -
Blo01g01301 820 Pfam Galactose binding lectin domain 743 819 IPR000922 GO:0030246
Blo01g01301 820 SUPERFAMILY Galactose-binding domain-like 579 722 IPR008979 -
Blo01g01301 820 Gene3D - 588 704 - -
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Blo01g01301 820 Pfam Beta-sandwich domain in beta galactosidase 353 423 IPR041392 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01301 Blo-Chr1:49842744 Blo02g00679 Blo-Chr2:18722204 0 dispersed
Blo15g00377 Blo-Chr15:5262207 Blo01g01301 Blo-Chr1:49842744 5.59E-91 dispersed
Blo15g00378 Blo-Chr15:5264100 Blo01g01301 Blo-Chr1:49842744 0 dispersed
Blo01g01301 Blo-Chr1:49842744 Blo06g00332 Blo-Chr6:19843478 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01301 - - mcha:111011842 1139.02