Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01303 ATGAGCTACGTGAAGCCTCCAGCAAAGGGTGTCATCAAAGGAATGTTCGTGCCCAAGCTCAGCGGGCAGGGTGCCATTGGCGATACCATTGCTCTCTTGGGTGCTCTCATCATGCCGCACAATCTCTTCCTCCATTCCGCTCTTGTGCTGTCTAGAAGAGTCCCGAATACTGTCCGTGGAATCAACGACGCATGCAGATGTTTCCTGATGGAGAGTGGGTTTGCGTTGTTCGTGGCATTTTTAATCAACGTGGCAATGATCTCAGTCACAGGCGCTGTGTGTAATGCCCCCAATATTTCGCAGGACACAGCCGATCGCTGCGGTGACATCACTCTAAATTCTGCCTCTTTCCTTCTTCAGAATGTGTTGGGAAAATCAAGTTCAACTCTGTATGCAATAGCTCTACTGGCCTCAGGTCAAAGCTCAACCATTACAGGAACTTATGCTGGACAATATATTATGCAGGGCTTCTTGAACCTTAAAATGAAGACGTGGCAGAGGAACTTGCTGACAAGGTGCATTGCCATCATCCCTAGCTTGATTGTCTCCATCATCGGCGGTCCTCAGGGTGCTGGACAGCTCATCATCATCGCCTCGATGATACTTTCATTTGAACTTCCATTTGCGCTGATCCCACTTCTTAAATTTAGTAGCAGTTCAACAAAGATGGGTCCTCACAAAAACTCTATATCTATAATAGTGATCTCTTGGATTCTCGGCCTAGGAATCATAGGCATCAACGTGTACTACCTCAGCACAGGCTTTGTCAGTTGGCTAATTCACAACTCTTTGCCCAAAGTCGGAAATGTAGTCGTTGGTATCATAGTTTTTCCTCTGATGGCCATCTACGTTCTTGCAGTAATTTATCTCACTTTCAGAAAAGACGTTGTCGTCACCTATATCGAACCTGATGTTCAGGACCCTGTGACCCAAATGCAGATGGAGAAGGGGATAAGCGCCCCTTCCGGTCATCATCAAGACGACCCTCCACCTTTCAGACAAGATTTAGCTGATATCCCTTTGCCACAGTAA 1032 46.8 MSYVKPPAKGVIKGMFVPKLSGQGAIGDTIALLGALIMPHNLFLHSALVLSRRVPNTVRGINDACRCFLMESGFALFVAFLINVAMISVTGAVCNAPNISQDTADRCGDITLNSASFLLQNVLGKSSSTLYAIALLASGQSSTITGTYAGQYIMQGFLNLKMKTWQRNLLTRCIAIIPSLIVSIIGGPQGAGQLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSISIIVISWILGLGIIGINVYYLSTGFVSWLIHNSLPKVGNVVVGIIVFPLMAIYVLAVIYLTFRKDVVVTYIEPDVQDPVTQMQMEKGISAPSGHHQDDPPPFRQDLADIPLPQ 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49945022 49946719 - BLOR01303 Blo01g01303 55743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01303 343 PRINTS Natural resistance-associated macrophage protein signature 29 52 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo01g01303 343 PRINTS Natural resistance-associated macrophage protein signature 167 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo01g01303 343 PRINTS Natural resistance-associated macrophage protein signature 139 158 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo01g01303 343 PRINTS Natural resistance-associated macrophage protein signature 199 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo01g01303 343 PANTHER METAL TRANSPORTER NRAMP5 1 343 - -
Blo01g01303 343 Pfam Natural resistance-associated macrophage protein 3 229 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo01g01303 343 MobiDBLite consensus disorder prediction 317 343 - -
Blo01g01303 343 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 343 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01303 Blo-Chr1:49945022 Blo05g00159 Blo-Chr5:1436798 1.94E-125 dispersed
Blo01g01303 Blo-Chr1:49945022 Blo06g00647 Blo-Chr6:29455010 6.98E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01303 K21398 - pvy:116131612 529.635