Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01333 ATGACTTTGGGCTCTTCTCTCTCCACCCCCTTCTCCAATGGCGGAAAATCCTTTTTGGTCTCTGAATCTGGCCAGTTCGCCTTCGGGTTTTACCGGAAAGCGAACGGATTCGCTGTCGGAATCTGGGTCCATAATATCAAACAAAAAACAGTTATTTGGACTGCAAATAGAGACGATCCGCCGTTGTCGGACGACGTTAAGGTAATTCTAACTGCAGATGGAGAGCTGGTTTTGCAGCAGAAGGAAGCTCAAATGAAACTAATAATGGATTCTCCTGAGCCAGTTTTCATGGCTTCTGTTCTCAACTCCGGCAACTTCGTTCTCTACGATGCACATTCCAACGTCATTTGGCCGAGCTTCGATCTCCCGACCGACACCATTTTGCCCGGCCAACGTCTCCGGTCCGGCCATAACCTCGTCTCTAGCGTCTCCAACTCCGATCAAACTAGTGGCAAATTTAGGCTGTCGATGCTGGCTGACGGAAACCTCGTACTCTATCCATTTGACGCTGAAGCAATCAAGCAATACGCTTACTGGTCGACCGGAACGTACAACGCAGGATCCAACGTAAGTCTGAATCTGGATTCGAACGGTCAGCTTCAACTTCTCAACTCAACAAAATCCAACATTAAAAACATTAACAACGACAGAAACAAGCTCTCCGATTACAAAAATTATCTCTACCGCGCCGCCGTTGATTCCGGTGGAATACTTACAGTCTATTACCACAGCTCTAACCAAGACGACGATTGGTTAATCGATTGGGTTTCTTCCACAAATGGGTGCGATTCAATAGGGCTCTGCGGCTTAAATTCTTACTGTACTCTCGCCGTCCAAGGGACTTTCTGCATATGTCTTCCTGAATTCGTTTATGTCGATGAAAACGACAAGAAATTGGGTTGCCGGAGAAATTACAGCGACGGCTGTGAAAGAAATAATGGCCAAGTCTATTCTACATAG 960 46.56 MTLGSSLSTPFSNGGKSFLVSESGQFAFGFYRKANGFAVGIWVHNIKQKTVIWTANRDDPPLSDDVKVILTADGELVLQQKEAQMKLIMDSPEPVFMASVLNSGNFVLYDAHSNVIWPSFDLPTDTILPGQRLRSGHNLVSSVSNSDQTSGKFRLSMLADGNLVLYPFDAEAIKQYAYWSTGTYNAGSNVSLNLDSNGQLQLLNSTKSNIKNINNDRNKLSDYKNYLYRAAVDSGGILTVYYHSSNQDDDWLIDWVSSTNGCDSIGLCGLNSYCTLAVQGTFCICLPEFVYVDENDKKLGCRRNYSDGCERNNGQVYST 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50876513 50877472 + BLOR01333 Blo01g01333 55773

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01333 319 ProSiteProfiles Bulb-type lectin domain profile. 4 121 IPR001480 -
Blo01g01333 319 Pfam D-mannose binding lectin 50 135 IPR001480 -
Blo01g01333 319 ProSiteProfiles Bulb-type lectin domain profile. 124 253 IPR001480 -
Blo01g01333 319 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 318 - -
Blo01g01333 319 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 3 318 - -
Blo01g01333 319 Gene3D - 3 121 IPR036426 -
Blo01g01333 319 Gene3D - 122 254 IPR036426 -
Blo01g01333 319 Pfam S-locus glycoprotein domain 197 290 IPR000858 GO:0048544
Blo01g01333 319 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 140 IPR036426 -
Blo01g01333 319 SUPERFAMILY alpha-D-mannose-specific plant lectins 147 207 IPR036426 -
Blo01g01333 319 SMART blect_4 10 123 IPR001480 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01333 - - - jre:109011438 317.39
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01333 Blo-Chr1:50876513 Blo04g00963 Blo-Chr4:11803068 1.08E-75 dispersed
Blo01g01333 Blo-Chr1:50876513 Blo01g01338 Blo-Chr1:50933720 1.32E-169 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1252 Blo01g01333 . . . . . . . . Cmo12g00289 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000157 2 9 11 4 5 1 3 7 6 4 4 7 6 6 11 6 7 10 2 8 10 8 2 10 9 9 7 5 3 9 191
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01333 Blo_Chr01 FPKM 0.0 0.536928 1.336081 1.816522 1.348926 2.080997 2.222255 1.790379 2.183212 2.303063