Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01339 ATGCCGGGATTCCCCCCTAACATCGACGATCGGCAGATGGCTCTACAGGAAGCTGCCTCTCAAGGCATCAAAAGCATGGAACGCCTCATTTACGTTCTGTCTCAGAAGCAGCAATCTACTCACTCGGACTGCACCGACCTTACTGACGCCACCGTTTCGAAGTTCAAAAATGTCATTTCACTTCTCAACCGGACGGGTCACGCGAGGTTCAGGCGCGGTCCGATTTTCTCTCCCTCCTCCTCCTCCGCGTCTCTCTCCGTTCCTCACTCACAAACATTGAACCTCACACCGGCTACTTTAACTTTTCCGGTGACTGTCTCTACTGCTCCAATTGTTCCTCAGGCGAGTTTCGTTCAGCCTCAGCCGCAGAGCATGACTCTTGATTTCACGAAACCTAATATTTTGAACTCAAATGTTAAAAGTGTCGAGCTCGAGTTCGCTAAAGAGAGCTTCAGCGTCTCGTCCAGCTGCTCGTTCATGTCGTCAAACATCACCGGAGATGGGAGCGTATCGAACGGAAAGCTCGGATCTTCGATCTTCCTGTCTACCGCAACGACAGTCTCCGCCGGTAAGCCGCCTCTCTCAGCGGCGCTCTACAAGAAGAGGTGTCACTCCCACTCCCACTCCGAAAACGTGTCTGGGAAACTTTCCGGCTCAACTTCCGCTTCCGGCAAGTGCCACTGCTCCAAAAGAAGGAAAAATCGGGTAAAGAAAACTATCCGAGTGCCGGCGGTGAGTTCAAAGGTGGCGGATATTCCTCCGGACGAGTACTCGTGGAGAAAATACGGGCAGAAGCCGATCAAAGGGTCACCATACCCACGGGGATACTACAAGTGCAGCACAATCAGAGGATGCCCGGCTAGGAAACACGTGGAGAGGGCTACGGATGATCCGAAGATGCTGATCGTAACGTACGAGGGGGAGCACCATCATGCGCAGAGCGGGATGCAGGAGAACGCAGGTGGGTTGGTGTTCGAGTCAACGTGA 987 53.29 MPGFPPNIDDRQMALQEAASQGIKSMERLIYVLSQKQQSTHSDCTDLTDATVSKFKNVISLLNRTGHARFRRGPIFSPSSSSASLSVPHSQTLNLTPATLTFPVTVSTAPIVPQASFVQPQPQSMTLDFTKPNILNSNVKSVELEFAKESFSVSSSCSFMSSNITGDGSVSNGKLGSSIFLSTATTVSAGKPPLSAALYKKRCHSHSHSENVSGKLSGSTSASGKCHCSKRRKNRVKKTIRVPAVSSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTIRGCPARKHVERATDDPKMLIVTYEGEHHHAQSGMQENAGGLVFEST 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51012480 51014003 + BLOR01339 Blo01g01339 55779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01339 328 SUPERFAMILY WRKY DNA-binding domain 251 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g01339 328 Pfam Plant zinc cluster domain 200 251 IPR018872 -
Blo01g01339 328 MobiDBLite consensus disorder prediction 209 230 - -
Blo01g01339 328 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g01339 328 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 12 327 - -
Blo01g01339 328 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 327 IPR044810 GO:0003700
Blo01g01339 328 Gene3D WRKY domain 239 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo01g01339 328 MobiDBLite consensus disorder prediction 210 225 - -
Blo01g01339 328 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo01g01339 328 Pfam WRKY DNA -binding domain 255 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00693 Blo-Chr1:8317187 Blo01g01339 Blo-Chr1:51012480 6.64E-91 dispersed
Blo01g01339 Blo-Chr1:51012480 Blo16g00826 Blo-Chr16:34631010 2.50E-88 dispersed
Blo05g00636 Blo-Chr5:20014165 Blo01g01339 Blo-Chr1:51012480 5.70E-73 transposed
Blo12g00965 Blo-Chr12:27764937 Blo01g01339 Blo-Chr1:51012480 1.28E-66 transposed
Blo01g01339 Blo-Chr1:51012480 Blo12g01103 Blo-Chr12:28710504 1.12E-164 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11913 PF03106 WRKY 6.30E-26 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01339 - - bhj:120087087 446.432