Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g01344 | ATGACGATGTACTCCCACTTTGTCTGCCCCGTCAATGGACAAATCGAGTGGCCTCTTGTGACACATCTTGATCCAATTATCCCACCGCCATTTAAAAGGCTTTCAGGAAGGCGGGAAAAACATAGAATACGAGATGTGGACGAGGCCCCAAGCTGGACAGTGCTGCCCAGAAGACATATGAACATGACCTATGGTCGGTGTGGGGGTGTGGGGCACAATTCCTGCACGTGCGAAGGTGGAGGTGAGTCCAGAGCATGTGGCGGTAGAGGCAGAGGCAGAGGCAGAGGCGGCAGAGGAAGGTCAGAGGCCACATTTATGGGTTTCAGAGTCCCCGAGATAGGCCCCGAGACACAGTCTGCCATAGTCCCAGAGACAGTTTCTGAGACAGTTCTCGACAGAGTTCTTGAGATGCAGGTAGCTGGTGTTCCTGGTGTGACAGAAGCTTTATTTCTAGCTAGACAATCTGCAGTTTCACAAGAGAACACAAAGTCTAGTGAAACCCCAATGTTGTACTCTTGTGGTCTCTGTGGAAAAGGATACAGAAGTTCCAAAGCTCATGCTCAGCATCTTAAATCAAGAAGTCATACAACACGAGCTTCTCAAGGGTCCAATGAAGAAGATGAGAAGGCTTTAATCAAGCCACTTGTCCGGAGAACTGCAAATAAGATTCCCCAACAGAAAGGACATAATGAAGAAAGTGATGAGAGTGAAGATGAGTGGGAGGAAGTTGACCCAGATGAAGATTTGGTTATTGAGGCCACACAGTCCATGACTGGTATGAGGATGAAAGATCTTGATGGTGAGATGGGTGATGATGTGGATGACAATGATGACATCGAGGAGTTGGACCCATCATGCTGCTTTATGTGTGACCTGGATCATGACACTATTGAAAGTTGTATGGTTCACATGCACAAGCAGCATGGTTTCTTTATTCCCGATGTCGATTATTTGAAGGACCCAGCCGGCCTGCTTACTTATCTTAGCCTGAAGTGGATTGAGTTATCTATGAGGTTTAAGGTGGGGACCCAGGATGTTAGATTGCAGAGAGATCCAAGTCTTAGTAAGAATTCGGTGTCTTTAAAAGCCTTGATGAAAGCTATAAAAAAAGGCGGCGGCGAAGGAGTATTATTGGAATGCTACAACTTGCAGCTGACTGAGCCCCTTCCCGCACATGAGGATCATTACGAATTCTTGGTAATGTCTTTTGGCCCTTTTATTATCAAAGCTGATGCTTTGGGTTGTGGACTTGGGGCATGGCGACCATATTTATTGGGACATAAATTTATTGTTCAAACAGATCAACGTAGTATTAAGTTTCTTCTAGAGCAACGAGTGGTAAGTACCAACCACAAAAAATGGTTAACCAAACTAATGAGCTATGATTTTGACCAAAGAATCATCTATCATTCCTCTTCTACTCAAAGAATTTCATTGCATGACTTCCTGCACACTATTATTTCTGACAGAGATAAGGTTTTCCTTAGCCTATTTTGGAAAGAATTATTCAAACTACAAGGCACTAAGCTACAACATAGCACGACCTACCATCCTCAAACGGACGACTAA | 1569 | 44.68 | MTMYSHFVCPVNGQIEWPLVTHLDPIIPPPFKRLSGRREKHRIRDVDEAPSWTVLPRRHMNMTYGRCGGVGHNSCTCEGGGESRACGGRGRGRGRGGRGRSEATFMGFRVPEIGPETQSAIVPETVSETVLDRVLEMQVAGVPGVTEALFLARQSAVSQENTKSSETPMLYSCGLCGKGYRSSKAHAQHLKSRSHTTRASQGSNEEDEKALIKPLVRRTANKIPQQKGHNEESDESEDEWEEVDPDEDLVIEATQSMTGMRMKDLDGEMGDDVDDNDDIEELDPSCCFMCDLDHDTIESCMVHMHKQHGFFIPDVDYLKDPAGLLTYLSLKWIELSMRFKVGTQDVRLQRDPSLSKNSVSLKALMKAIKKGGGEGVLLECYNLQLTEPLPAHEDHYEFLVMSFGPFIIKADALGCGLGAWRPYLLGHKFIVQTDQRSIKFLLEQRVVSTNHKKWLTKLMSYDFDQRIIYHSSSTQRISLHDFLHTIISDRDKVFLSLFWKELFKLQGTKLQHSTTYHPQTDD | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 51086935 | 51104084 | + | BLOR01344 | Blo01g01344 | 55784 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g01344 | 522 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 171 | 200 | IPR013087 | - | |
Blo01g01344 | 522 | Pfam | C2H2 type zinc-finger (2 copies) | 287 | 331 | IPR041661 | - | |
Blo01g01344 | 522 | MobiDBLite | consensus disorder prediction | 200 | 215 | - | - | |
Blo01g01344 | 522 | Pfam | RNase H-like domain found in reverse transcriptase | 415 | 461 | IPR041373 | - | |
Blo01g01344 | 522 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 173 | 195 | IPR013087 | - | |
Blo01g01344 | 522 | MobiDBLite | consensus disorder prediction | 186 | 246 | - | - | |
Blo01g01344 | 522 | SUPERFAMILY | beta-beta-alpha zinc fingers | 170 | 203 | IPR036236 | - | |
Blo01g01344 | 522 | PANTHER | ZINC FINGER PROTEIN 622 | 135 | 331 | IPR040025 | - | |
Blo01g01344 | 522 | Gene3D | - | 437 | 522 | IPR036397 | GO:0003676 | |
Blo01g01344 | 522 | SUPERFAMILY | Ribonuclease H-like | 477 | 521 | IPR012337 | - | |
Blo01g01344 | 522 | MobiDBLite | consensus disorder prediction | 81 | 102 | - | - | |
Blo01g01344 | 522 | PANTHER | ZINC FINGER PROTEIN-RELATED | 135 | 331 | - | - | |
Blo01g01344 | 522 | SUPERFAMILY | beta-beta-alpha zinc fingers | 271 | 335 | IPR036236 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01344 | Blo-Chr1:51086935 | Blo05g00446 | Blo-Chr5:6170543 | 1.61E-57 | dispersed | |
Blo01g01344 | Blo-Chr1:51086935 | Blo10g00281 | Blo-Chr10:4055062 | 1.79E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g01344 | K14816 | - | zju:107420801 | 279.256 |