Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01345 ATGGACTTGTTACATTCTATTCGTGTAAACACTGTTCCTCTCTCTATTGACCGACCTCACTCCGTCCTTCCGATCTTTCTCAACCGCCGAAGTGGGATAAGAAATTCTTCGCCAATTTCAGTTTCGAAGTTTGTGGCTCGAGTTTCCAGTAATGGTGTGGCAACGAAGAGGAGTAGTCTACCATCTTTGACGGAATCCGAAGCCTTGGAATTGGGGAAGACCAGTGCTGGTAGTGCCTTGGAGCAGCTTGACATTGAGCGCGGAGTTTGTGTTCCATTTCGCAAGTATTCTCCGGAGACAGTCAGGAATAAGGTATTGGAATCCAGAGGAGCTATTCTGTCTCTTATGTATCGTGGTGTGGAAATAGTATGGAGTTTGGGACTTTATTGGTCTACTCTCATGTATGATTACTTCATTGGAAGGGATGAAGAAGTTGTTCCCTATCGTGCTCGGCAGCTTAGAAACCTCCTTTGTGATTTAGGACCTTCATTTATCAAAGCTGGTCAGGTTCTTGCGAACAGGCCTGACATAATAAGGGAAGATTATATGAATGAGCTTTGTATTCTTCAAGATGACGTTCCACCTTTTCCCAATCAGGTAGCTTTTAAAATTATAGAGGCAGAATTAGGCAAACCACTGGAAGCTGTTTTCAGTAAAATTTCTTCACGGACAATAGCAGCTGCAAGTTTGGGTCAAGTTTATCGAGCTACTTTACGTGATTCTGGTGAAGATGTTGCTATTAAGGTTGTGCAAAGGCCTGAGATTGAGCCTATAATTTACCGGGATCTTTTTCTGTTTCGTACCCTTGCTTCATTTTTAAATGGCATCAGTTTACAAAAGTTAGGTTGCAATGCTGAGCTCATAGTGGATGAATTTGGTGAAAAGCTTTTGGAGGAGCTTGATTATACATTGGAGGCACGGAATATTGAAGATTTTATTGAGAACTTCAAAAATGATCTAACTGTCAAAATTCCTCTGGTTTACAAACAACTTTCTGGTCCACATGTTTTGGTGATGGAGTGGATTGATGGTATTCGCTGCACTGATCCACAGGCTATAAAAGATGCTGGTATTGATGTAAATGGTTTTTTAACTGTTGGGGTGAGTGCTGCATTGCGTCAACTTCTAGAATTTGGGTTGTTTCATGGAGATCCTCATCCCGGAAATATTTTTGCAATGCGTGATGGTCGTATTGCTTATGTTGATTTTGGAAATGTTGCTGAGCTTAGTCAGCAAAATAAACAAATTTTGATTGATGCTGTTGTCCATGCTGTGAATGAGGACTATGCTGAGATGGCAAATGATTTCACCAGGCTCGGTTTCTTGGCTCCAGGGACTGATGTCTCCCCAATCGTTCCAGCTTTAGAAGCAATTTGGCAGAACTCTGCTGGAAAAGGACTTGCTGATTTTAACTTCCGAAGTGTCACGGGTAATTTTAATCAGCTGGTGTACAACTATCCCATTCGGATTCCAGAAAGATTTTCCCTTGTTATCCGCTCTTTATTGACTCAAGAGGGTATTTGTTTTACTTTAAAGCCGGACTTCAAGTTCCTAGAGGTTGCTTATCCATATGTGGCAAAGCGTCTCTTAACAGATCCAAATCCTGCTTTACGAGAACGCCTCGTACAGGTTCTGTTCAAAGACGGAATTTTTCAATGGAAGCGGCTTGAAAACCTCATTGTTCTAGCGAAGGAAAATGTTTCCAAGATGAGCAACAACCCAGCATTGCAACAGGACAAGTGTTCAAAAGCTTTACAGGTTGAGAGGAAATTGGACCTAACTGATACTATCAAGGACGGAGCTCGCCTTTTTCTAGTTGATGAAGGAATTCGAAGACAGCTTCTTCTTGCTTTGACTGAAGACTCAAAACTTCATATTCAAGAGCTTGTGGATGTCTACAGACTAGTTGAAGATCAAATAGACATTCCGTCAGTTGCTTTGGAAGTAGCTCGAGTTGACGGAACCATGCCTCATAAAGTGAAATATGGAATAGATTACGATGATGACTATGATGAGTACAAAGATGATGGTTATGATTATGATTATGGCTATGATTTTGACAATGAAGATCAAGATGAGTGGATAATTGAACTTGTGTCACTATTTCTTCATCCCTTTGTACTTCTTGCTTTCTGTGGTACACCTGAGTCTAGTCGATTAACTAAGAACCCTGGGATCTGGCGTTGTTCCATTTGTACTTATGATAATGATCAAAGCTTATCTGCGTGTGAGATATGTGGGGTTCTTCGAAATCCTTTGGTCAACAATGGCAGCCAAAGAAGAGATTTCTTTTATGCAGTTGTGGGCTTATGCAAAGACTCTGGAGTGTCCATAATGGCCAAGTCTCTTTTTGCATCATCACCACGTGTCATTCCCAAAAAGGCTGTATTAGTGCAAGAGCAGAATGATGAATCTGAGACAAAAAAGAACAATAACCTCATCAAGAGTGGGGATGTTTATGAAGTTCTCCACAAATTTCATAAAGATTTAGTTTTATTATGCCTGATTGAAACAAAATTTAACCAAACTCCTTTATACGTCTCAGCTCCTTTCAAGTTTGATGTTCCATCACCTGATGACGTGGTTTCTAATGGATTGCATTCCTCCAAAACTAATTTGAAAGCAAGCCACACATACTTAAAATCAGCAGAAGCCTTTTCAGATACAGATGGCATTTCAAGTTCTATAAAGGCAGCTTATACTGCTGAAAGGTCTGATAGCACTGGTTCCACAATGCCAAATAGCAGAGTGGATGGTTATAGAAAGGATGCAGCAATTAATGCACAATCAAGTTTTGAGATTTCAGATGGTTCATCTACATCAAGGAGGAAAAGTATAAAAGTTCAAGCAGAGAAGATCAAGTTCTCTGAGAACTTAAGCACAGATGTAAGATCAGATAAAAGATCAGAGAGTTCTTCTGCATTGTTGTCGAATAATACAGATGAAATTGTTGATATTAGCACCAATTCTGCAATAAATCAGCACAAGTTAAAAGGTCTTACTACTAGTTTGAAAAATGTGGGTCTAGATGTTAGATCTCCATATTCAAATGTTACTGCTAAAGGAGCAGATTTGCATGCACAGTATAAAACTGAAAAGTGGATGCTCCCTGATCAAGCTGTTGGTTCTTTGACTCAACTGAATCTTGCAATAGGCAAGGGGTCGTTTGCTTTTGCCTGGGCATTGGATGAGAGTGCTGAAGAAAGAGAAAGAGGAATAACTATGACCGTTGGTGTTGCATATTTTGATTCTAGAAGATATCATATTGTGGTCCTTGACTCCCCAGGTCACAAAGATTTTGTTCCAAATATGATCTCCGGGGCCACACAAGCTGATGCTGCAATTCTTCTCATTGATGCCTCGGTTGGTGCATATGAAGCTGGCATGGATGGTGCTAAGGGACAGACAACGGAGCACGCACAGCTTATCAGAAGTTTTGGTGTTGACCAAATTATTGTTGCGGTAAACAAAATGGATGTGGTGGAGTATTCCAAGGATCGTTATGACTCTATAAAGCTGCAAATGGGTACATTCCTTCGTACATGTGGTTTTAAAGATTCTTCCATGTCTTGGATTCCATTGAGCGCCATGGGAAATCAAAATTTGGTGTCTGCCCCTTCTGACATCCGTCTCTCGTCCTGGTATCATGGACCTAATTTGTTGGAGGCAATTGATCGTTTTCAACCTCCAACTAGGGATTACTCAAAGCCTTTGCTTATGCCAATTTGTGATGTTATAAAAACACTTCCAATCGGACAAGTGTCTGTTTGTGGAAAATTGGAAGCTGGGGCTTTTCGAGTTGGATCTAAGGTTCTTGTTATGCCATCTGGTGCTATTGGAACATTGCGATCCTTAGAGCGTGATTCTCATGCTTGCACAGTTGCACGAGCTGGAGACAATGTGACTGTCAGCCTTCAAGACATCGTTGAGAGTCACGTGATGGCTGGGGGTGTACTTTGTCACCCTGATTTTCCTGTTGCCATTGCAAAACATTTGGAATTGAAGGTGTTCGTCTTGGAATTTGCGACCCCAATTCTAATTGGATCCCAGTTGGAAGTTCATGTACATTGTTCAAAGGAAGCTGCTAGGGTCGTAAAAATTGTGTCATCACTCGATCCAAAGACTGGTAAGACTATAAAGAAGGCCCCGCGCATTCTCATCCCCAAGCAAACTGCCATTATTGAGGTAGTATTACATGGTTCTGTGTGCGTTGAAGCGTTCTCAACAAGTAAAGCTCTTGGGAGGATATTTCTACGAGCTTTAGGAAGAACAGTGGCAGTTGGGGTCATTACCCGAATAATTGAAGCGCCGGAATAA 4317 41.14 MDLLHSIRVNTVPLSIDRPHSVLPIFLNRRSGIRNSSPISVSKFVARVSSNGVATKRSSLPSLTESEALELGKTSAGSALEQLDIERGVCVPFRKYSPETVRNKVLESRGAILSLMYRGVEIVWSLGLYWSTLMYDYFIGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNQVAFKIIEAELGKPLEAVFSKISSRTIAAASLGQVYRATLRDSGEDVAIKVVQRPEIEPIIYRDLFLFRTLASFLNGISLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFIENFKNDLTVKIPLVYKQLSGPHVLVMEWIDGIRCTDPQAIKDAGIDVNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAPGTDVSPIVPALEAIWQNSAGKGLADFNFRSVTGNFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLVQVLFKDGIFQWKRLENLIVLAKENVSKMSNNPALQQDKCSKALQVERKLDLTDTIKDGARLFLVDEGIRRQLLLALTEDSKLHIQELVDVYRLVEDQIDIPSVALEVARVDGTMPHKVKYGIDYDDDYDEYKDDGYDYDYGYDFDNEDQDEWIIELVSLFLHPFVLLAFCGTPESSRLTKNPGIWRCSICTYDNDQSLSACEICGVLRNPLVNNGSQRRDFFYAVVGLCKDSGVSIMAKSLFASSPRVIPKKAVLVQEQNDESETKKNNNLIKSGDVYEVLHKFHKDLVLLCLIETKFNQTPLYVSAPFKFDVPSPDDVVSNGLHSSKTNLKASHTYLKSAEAFSDTDGISSSIKAAYTAERSDSTGSTMPNSRVDGYRKDAAINAQSSFEISDGSSTSRRKSIKVQAEKIKFSENLSTDVRSDKRSESSSALLSNNTDEIVDISTNSAINQHKLKGLTTSLKNVGLDVRSPYSNVTAKGADLHAQYKTEKWMLPDQAVGSLTQLNLAIGKGSFAFAWALDESAEERERGITMTVGVAYFDSRRYHIVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAYEAGMDGAKGQTTEHAQLIRSFGVDQIIVAVNKMDVVEYSKDRYDSIKLQMGTFLRTCGFKDSSMSWIPLSAMGNQNLVSAPSDIRLSSWYHGPNLLEAIDRFQPPTRDYSKPLLMPICDVIKTLPIGQVSVCGKLEAGAFRVGSKVLVMPSGAIGTLRSLERDSHACTVARAGDNVTVSLQDIVESHVMAGGVLCHPDFPVAIAKHLELKVFVLEFATPILIGSQLEVHVHCSKEAARVVKIVSSLDPKTGKTIKKAPRILIPKQTAIIEVVLHGSVCVEAFSTSKALGRIFLRALGRTVAVGVITRIIEAPE 1438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51097906 51117353 - BLOR01345 Blo01g01345 55785

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01345 1438 CDD ABC1_ADCK3-like 189 436 - -
Blo01g01345 1438 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1041 1238 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 SMART zf_4 725 749 IPR001876 -
Blo01g01345 1438 PRINTS GTP-binding elongation factor signature 1151 1160 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 PRINTS GTP-binding elongation factor signature 1070 1078 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 PRINTS GTP-binding elongation factor signature 1106 1117 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 PRINTS GTP-binding elongation factor signature 1090 1100 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 SUPERFAMILY Ran binding protein zinc finger-like 723 750 IPR036443 -
Blo01g01345 1438 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 52 651 - -
Blo01g01345 1438 Pfam ABC1 atypical kinase-like domain 189 434 IPR004147 -
Blo01g01345 1438 Gene3D - 1031 1231 IPR027417 -
Blo01g01345 1438 Gene3D - 716 755 - -
Blo01g01345 1438 Gene3D Translation factors 1234 1324 - -
Blo01g01345 1438 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 52 651 - -
Blo01g01345 1438 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1330 1434 IPR009001 -
Blo01g01345 1438 Gene3D Transferase(Phosphotransferase) domain 1 203 418 - -
Blo01g01345 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1247 IPR027417 -
Blo01g01345 1438 ProSiteProfiles Zinc finger RanBP2 type profile. 723 752 IPR001876 -
Blo01g01345 1438 MobiDBLite consensus disorder prediction 900 915 - -
Blo01g01345 1438 ProSitePatterns Zinc finger RanBP2-type signature. 727 746 IPR001876 -
Blo01g01345 1438 Gene3D Translation factors 1328 1436 - -
Blo01g01345 1438 ProSiteProfiles Protein kinase domain profile. 219 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01345 1438 MobiDBLite consensus disorder prediction 900 920 - -
Blo01g01345 1438 CDD HBS1_C_III 1325 1433 - -
Blo01g01345 1438 Pfam Elongation factor Tu C-terminal domain 1328 1433 IPR004160 -
Blo01g01345 1438 Pfam Elongation factor Tu GTP binding domain 1059 1227 IPR000795 GO:0003924|GO:0005525
Blo01g01345 1438 SUPERFAMILY Translation proteins 1235 1358 IPR009000 -
Blo01g01345 1438 SUPERFAMILY Protein kinase-like (PK-like) 190 406 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01345 - - - jre:109009585 1064.68
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01345 Blo-Chr1:51097906 Blo01g01665 Blo-Chr1:56394273 1.74E-107 dispersed
Blo16g00682 Blo-Chr16:26437721 Blo01g01345 Blo-Chr1:51097906 4.88E-71 dispersed
Blo01g01345 Blo-Chr1:51097906 Blo12g00833 Blo-Chr12:26635082 1.60E-112 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g213 Blo01g01345 . Bda01g00706 . . . Bma04g00312 Bma01g02132 . . . Cma05g00634 . . Sed01g1309 . . Bhi04g01074 Tan02g2645 Cmetu03g0988 . Hepe10g0312 . Lcy13g1339 . . . . . . . Cone4ag1851 Cone7ag1756 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy03g01187 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007163 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6 2 1 37