Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01357 ATGACGACTTTGTCGTCGTCGGAAACGAGGTCGCCGTTTCCGCTGCTCTTCAGGAGACACTCAAGCGGCGACGTAAAAATCTTAACGTCGGTTTCGAGTAGTCTCTTGCCGGCGTTCGGAACAGTCGTAGATGAAGGATATTTACACCTCAAAAGATTCATCATTGTTCCCTATGATCGTAGATATCGGTTATGGCAGACCTTTTTGGTTGTACTAGTGGTGTACTCAGCATGGGCATCTCCTTTCGAACTAGCCTTCAAAAAAGTGGCAACTGGGTCTCTCCTCCCCGTTGATTTAGTTGTCGATGGCTTCTTTGCAATTGATATAGTCATGACTTTCTTTGTGGCATACTTGGATAAATCAACCTATCTCCTCGTTGATGATCATAAGAAGATAGCAAGAAGATACCTTACTAGCCTAAGGTTTCCTATGGACGTAGCCTCAACTCTTCCATATCAAATAATATACAGAATATTCACCGGAGAGTTGCACAATGGTGAGACCTTTGGTTTCCTCAACTTTCTCCGCTTTTGGCGACTCAGGCGTGTTAGTCAGCTATTTGCTAGGCTAGAGAAAGATACGCGCTTCAGCTACTTTTGGACAAGATATATCAAACTAATTTGCGTGACGTTGTTTGCTGTGCATGGAGCAGGGTGCTTTTACTTTTGGATGGCAACTCGTTACAAAGATTCAGCAAACACGTGGATTGGAGCAGAAGTCCCGGACTATGAGCAGCAGAGCATTTGGGTCTGCTATACTTACTCAATGTACTGGTCCATTGTCACCCTCACTACAGTCGGCTATGGTGACCTGCACGCAGTCAATATAGGGGAGAAGATATTTAGCATCTTCTACATGCTCTTCAACATCGGCCTCACAGCTTATTTGATTGGCAACATGACGAATCTAATTGTTCACAGTGCTGTTCGAACCTTTGCCATGAGAGATGCAATCAATGAGATACTAAGATATGCAAGCAAGAGTAGGCTACCAGACGGGTTAAAAGCCCAAATGCTGGCACACATGCAGCTCAAGTTCAAGACAGCAGAACTGCAGCAAGCAGAAGTGCTTGGGGACTTGCCTAAAGCAATAAGATCGAGCATTGCTCAGCACCTGTTTCGAAGAACAGTGGAAGATGCATACCTATTCAAGGGAGTCTCTGAAGATCTGATTGTGCAATCGGTATCAGAGATGAAAGCAGAATATTTTCCACCCAAAGTTGATATTATATTGCAAAACGAGATACCCACAGATTTCTACATTTTGGTATCTGGAGGAGTGGATGTGCTGTCAAACAAGAATGGAGCAGAACAGATTTTAACAAGACTGGGACCCGGAGACATGGCAGGAGAAATTGCGGTACTGTTTAATATTCCACAACCTTTCACAATAAGAACAAAGAGGCTTTCTCAAGTTGTGCGCATCAGTCATCATAATATCAAGCAGATGATACAACCACACAGTGATGGGAAGATCATTATTTCTAACTTCATACAGTATTTGAAGGGCTTGAAACAAGAGTTGCTTGATGAAATACCATATCTTAAGGAATTGCTTGGTGACTTGAATATGGAGTGTGCAGAGCAAAATGTCGAGACATGTAATCAAGAAGCATCAAATTCTCAGAGAGATGAAAAAACAGAAGGAAGACCGAAAACTTTTGTTCCTCAATCAACACTTCCCAAGAGGGTGATAATTCATGGACATCATCCAGACAAAGATACCAATAAAGATGACAGCATGGGAAAACTTATACATCTGCCAAATTCAGTAGAAGAACTCATTATATTAGCAGAGAAAAAGTTTGGCAAAAGAGGAAAAACAATTCTAATGGCTGATGGCTTAGAAGTGGAGGACTTGAATGCTTTAAGAGAGAACGATCACTTATTTATTGTTTAA 1899 42.02 MTTLSSSETRSPFPLLFRRHSSGDVKILTSVSSSLLPAFGTVVDEGYLHLKRFIIVPYDRRYRLWQTFLVVLVVYSAWASPFELAFKKVATGSLLPVDLVVDGFFAIDIVMTFFVAYLDKSTYLLVDDHKKIARRYLTSLRFPMDVASTLPYQIIYRIFTGELHNGETFGFLNFLRFWRLRRVSQLFARLEKDTRFSYFWTRYIKLICVTLFAVHGAGCFYFWMATRYKDSANTWIGAEVPDYEQQSIWVCYTYSMYWSIVTLTTVGYGDLHAVNIGEKIFSIFYMLFNIGLTAYLIGNMTNLIVHSAVRTFAMRDAINEILRYASKSRLPDGLKAQMLAHMQLKFKTAELQQAEVLGDLPKAIRSSIAQHLFRRTVEDAYLFKGVSEDLIVQSVSEMKAEYFPPKVDIILQNEIPTDFYILVSGGVDVLSNKNGAEQILTRLGPGDMAGEIAVLFNIPQPFTIRTKRLSQVVRISHHNIKQMIQPHSDGKIIISNFIQYLKGLKQELLDEIPYLKELLGDLNMECAEQNVETCNQEASNSQRDEKTEGRPKTFVPQSTLPKRVIIHGHHPDKDTNKDDSMGKLIHLPNSVEELIILAEKKFGKRGKTILMADGLEVEDLNALRENDHLFIV 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51536529 51547663 + BLOR01357 Blo01g01357 55797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01357 632 SUPERFAMILY cAMP-binding domain-like 311 489 IPR018490 -
Blo01g01357 632 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 64 631 - -
Blo01g01357 632 Coils Coil 524 544 - -
Blo01g01357 632 ProSiteProfiles KHA domain profile. 563 632 IPR021789 -
Blo01g01357 632 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g01357 632 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g01357 632 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g01357 632 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g01357 632 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo01g01357 632 PANTHER POTASSIUM CHANNEL AKT1 4 63 IPR045319 GO:0005249|GO:0006813
Blo01g01357 632 SUPERFAMILY Voltage-gated potassium channels 57 305 - -
Blo01g01357 632 Pfam Cyclic nucleotide-binding domain 402 485 IPR000595 -
Blo01g01357 632 MobiDBLite consensus disorder prediction 533 554 - -
Blo01g01357 632 Gene3D - 63 306 - -
Blo01g01357 632 CDD CAP_ED 382 489 IPR000595 -
Blo01g01357 632 Pfam Ion transport protein 63 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo01g01357 632 ProSiteProfiles cAMP/cGMP binding motif profile. 382 489 IPR000595 -
Blo01g01357 632 PANTHER POTASSIUM CHANNEL AKT1 64 631 IPR045319 GO:0005249|GO:0006813
Blo01g01357 632 Pfam KHA, dimerisation domain of potassium ion channel 562 631 IPR021789 -
Blo01g01357 632 SMART cnmp_10 382 499 IPR000595 -
Blo01g01357 632 Gene3D Jelly Rolls 350 514 IPR014710 -
Blo01g01357 632 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 4 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01357 Blo-Chr1:51536529 Blo14g00462 Blo-Chr14:5703453 0 dispersed
Blo03g00302 Blo-Chr3:5890035 Blo01g01357 Blo-Chr1:51536529 5.84E-168 transposed
Blo01g01357 Blo-Chr1:51536529 Blo12g01092 Blo-Chr12:28596716 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01357 K21867 - csin:114306787 955.666