Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01363 ATGCCACCGCCTGGCAGCGGTGGATTCCCGTTTGGAAATGGAGGGGGAGGTGGGTCAAGTGGATTTAACCCTAGAAATGCAGAGGATATCTTTGCAGAATTTTTCGGAAGTAGCCCTTTTGGCTTTGGTTCTTCAGGCCCTGGAAGGTCTATGAGATTCCAGTCAGATGGAGGAATTTTTGGGGGATTCGGAGGAGAAAAAATTTTCAGAACATACAGTGAGGGCGTTGTGCCGAAAAAACCCCCACCCGTGGAGAGCAAATTGCCTTGCAGTCTCGAGGAGCTGTATTCTGGATCCACAAGGAAAATGAAGATATCAAGGACCATCGTTGATGCCAATGGACGTCAAGTGCCGGAAACAGAGATATTGACAATCGAAGTGAAGCCGGGTTGGAAGAAAGGCACGAAGATCACTTTCCCGGATAAAGGGAATGAACAGCCCAACCAACTTCCTGCAGACTTGGTGTTTGTAATTGACGAGAAGCCTCACAAGGATTTCCAAAGAGATAGTAACGATCTGATTATGAATTATAAGATTTCGTTAGCAGAAGCTCTTGGTGGGACCACTGTAAAACTCACAACGCTGGACGGTCGTGATCTGTCGATCCCTGTGACGGACATTGTGAGCCCAGGCTACGAGCTCGTGATTGCTAGAGAAGGAATGCCGATAGTGAAAGAACCCGGAACCAGGGGTGACCTCAGGATCAAATTCGAGGTGAGTTTCCCCACAAGATTGTCTGCCGACCAACGTGCAGGGCTTAAGCACGCATTAGGGGGTTGA 780 48.72 MPPPGSGGFPFGNGGGGGSSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSMRFQSDGGIFGGFGGEKIFRTYSEGVVPKKPPPVESKLPCSLEELYSGSTRKMKISRTIVDANGRQVPETEILTIEVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHKDFQRDSNDLIMNYKISLAEALGGTTVKLTTLDGRDLSIPVTDIVSPGYELVIAREGMPIVKEPGTRGDLRIKFEVSFPTRLSADQRAGLKHALGG 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51791502 51792615 + BLOR01363 Blo01g01363 55803

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01363 259 Pfam DnaJ C terminal domain 84 242 IPR002939 -
Blo01g01363 259 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 2 259 - -
Blo01g01363 259 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 251 IPR008971 GO:0006457|GO:0051082
Blo01g01363 259 CDD DnaJ_C 82 245 - -
Blo01g01363 259 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 259 - -
Blo01g01363 259 SUPERFAMILY HSP40/DnaJ peptide-binding domain 83 164 IPR008971 GO:0006457|GO:0051082
Blo01g01363 259 MobiDBLite consensus disorder prediction 1 23 - -
Blo01g01363 259 Gene3D - 83 161 - -
Blo01g01363 259 Gene3D - 163 243 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01363 K09510 DNAJB4; DnaJ homolog subfamily B member 4 - csv:101204033 405.601
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01363 Blo-Chr1:51791502 Blo02g00124 Blo-Chr2:1034909 2.57E-90 dispersed
Blo01g01363 Blo-Chr1:51791502 Blo15g00463 Blo-Chr15:7249537 2.84E-95 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g373 Blo01g01363 . Bda01g00723 . . . . Bma01g02150 . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1734 . . . . Chy04g00340 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007809 1 1 1 1 1 1 2 1 1 1 1 1 2 0 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01363 Blo_Chr01 FPKM 19.087149 20.451401 17.045727 18.951754 19.418213 19.528303 19.738747 22.076891 19.374739 20.656456