Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01371 ATGTCTGGATCAACAATGGTGGGAGATGCGAGCTCGTGGTCCCGCGCGCTCGTCAAGATCTCTCCTTATACCTTTTCTGCTGTGGGAATTGCCGTCGCTATCGGCGTTTCCGTTCTCGGCGCCGCCTGGGGGATTTATATAACTGGAAGTAGTTTGATTGGGGCGGCGATCAAAGCTCCGCGTATTACTTCGAAGAATTTAATAAGTGTAATTTTTTGCGAAGCAGTGGCCATATATGGTGTTATTGTGGCCATCATCTTACAAACAAAGTTAGAGAGTGTTGCATCATCACAAATGTATGCCCCGGAGTCTCTTAGGGCAGGATATGCGATTTTTGCCTCTGGACTTATTGTGGGCTTTGCAAACCTCGTCTGCGGGTGCACCACTTTCTCTCATTCATTTTATTTCATCTCTTTAATTTACCTTTGTAGATTGTGTGTGGGAATAATTGGAAGCAGCTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTAAAGATTCTTGTTATTGAGATCTTTGGTAGTGCCCTTGGGCTATTTGGTGTGATTGTCGGAATCATAATGTCAGCTCAAGCTTCTTTTCCAGCAAGGGTTCCGTGA 603 44.78 MSGSTMVGDASSWSRALVKISPYTFSAVGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVASSQMYAPESLRAGYAIFASGLIVGFANLVCGCTTFSHSFYFISLIYLCRLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASFPARVP 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51935608 51937039 + BLOR01371 Blo01g01371 55811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01371 200 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 4 127 - -
Blo01g01371 200 Gene3D - 137 195 IPR035921 -
Blo01g01371 200 Gene3D - 23 132 IPR035921 -
Blo01g01371 200 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Blo01g01371 200 CDD ATP-synt_Vo_c_ATP6F_rpt2 107 189 - -
Blo01g01371 200 SUPERFAMILY F1F0 ATP synthase subunit C 105 190 IPR035921 -
Blo01g01371 200 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 142 196 - -
Blo01g01371 200 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 142 196 - -
Blo01g01371 200 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 127 - -
Blo01g01371 200 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Blo01g01371 200 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Blo01g01371 200 Pfam ATP synthase subunit C 112 189 IPR002379 GO:0015078|GO:0033177|GO:1902600
Blo01g01371 200 PRINTS Vacuolar ATP synthase 16kDa subunit signature 39 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo01g01371 200 PRINTS Vacuolar ATP synthase 16kDa subunit signature 66 89 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01371 Blo12g01087 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01371 Blo-Chr1:51935608 Blo18g00785 Blo-Chr18:22701057 1.10E-17 dispersed
Blo01g01371 Blo-Chr1:51935608 Blo12g01087 Blo-Chr12:28532149 1.58E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01371 K03661 - rcu:8284846 299.671