Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01381 ATGGAAGCGAATGCAGGAATGGTTGCTGGGTCCTACAAGAGAAATGAGATTGTTCGGATTCGTCACGATTCTGACGGCGGGGTTAGTCTTTCGAAGTCTCTACTCCGTCTAGAACTCTGTATTTCTACGATCTGGTTGTCTCTTCTTACTTTCTTCGTAGTCGATCTGGGAGATAGAGTTTGTTTGTTTGCTCCAAAACCTTTGAAGAATTTGGACGGCCAAATTTGTCAGATATGTGGTGACACTGTCGGACTCACAGCCTCCGGTGATGTATTTGTTGCGTGCAACGAATGTGCTTTCCCTGTTTGTCGGCCTTGTTATGAGTATGAGAGGAAAGATGGGAACCAATCTTGCCCCCAGTGCAAGACTAGATACAAAAGGCACAAAGGAAGTCCGCGAGTGGACGGAGACGATGATGAGGATGATGTTGATGATATTGAAAACGAGTTCAATTATTCCCAAGGAAATAGCAATGCAAGACGGAAGTGGCGTGGAGAAGATGCTGATCTGTCATCATCTGCTAGGCACGAGTCCCGTCAACCAATACCCCTTCTGACAAATGGGCAACCTATCTCTGGTGAAATTCCTGCTACACCAGACAACCAATCTGTTCGAACAACCTCAGGGCCCTTAGGTCCTTCTGAAAAAAATTCACTCAATTACATCGATCCTCGACAGCCAGTTCCTGTGAGAATTGTGGATCCATCTAAAGACTTGAACTCTTATGGTCTTGGAAATGTTGACTGGAAGGAAAGAGTGGAAGGCTGGAAGCTCAAACAAGAGAAAAACCTGATGCAGGTGACTAGTAGATACACTGAGGGGAAGGGGGATATTGAAGGTACAGGCTCTAATGGAGAAGAACTGCAAATGGCCGATGATGGTAGACAACCTTTGAGTCGTGTGGTTCCCATTTCTTCTTCTCACTTGACTCCCTACCGAGTCGTGATCATACTCCGGCTTATTATTTTGGGATTCTTCTTACAGTACCGAGTATCACACCCTGTGAAGGACGCATATGGGTTGTGGCTCACATCAGTTATCTGTGAGATTTGGTTTGCATTATCATGGCTATTGGATCAGTTTCCTAAGTGGTCTCCCATTAATCGCGAGACCTATCTTGACAGGCTCACATTGAGATATGATCGTGACGGAGAGCCATCACAGCTTGCTCCCATAGATGTTTTTGTTAGTACAGTGGATCCTCTTAAAGAGCCTCCACTCATTACAGCAAACACTGTTCTTTCCATACTTGCTGTGGATTACCCTGTTGACAAAGTCTCTTGCTATGTCTCTGATGATGGTTCAGCAATGCTAACCTTCGAGGCACTCTCTGAAACTGCAGAATTTGCAAGAAAGTGGGTGCCCTTCTGCAAGAAGCATAACATTGAGCCAAGGGCTCCTGAATTTTATTTTGCTCAGAAAATAGACTACTTAAAGGATAAGATACAGCCCTCATTTGTGAAAGAGCGCCGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTTAGGGTAAACGCACTTGTCGCCAAGGCTCAGAAGATGCCCGAAGAAGGCTGGACGATGCAGGATGGTACTCCATGGCCTGGAAATAACTCTAGGGATCATCCAGGAATGATCCAGGTTTTTCTGGGACATAGTGGAGGACTAGACACAGATGGAAATGAGCTTCCTAGACTTGTTTATGTTTCTCGAGAAAAAAGACCCGGCTTCCAACATCATAAGAAAGCCGGAGCAATGAATGCATTGATTCGAGTTTCAGCTGTCCTTACCAATGGAGCATACCTCCTGAATGTTGATTGTGACCACTATTTTAACAACAGCAAAGCTCTCAAGGAAGCTATGTGTTTTATGATGGATCCTGCTTTTGGAAAGAAGACTTGCTACGTACAATTCCCACAGCGTTTTGACGGCATCGATTTGCATGATCGATACGCCAATCGTAATATTGTTTTCTTTGATATCAACTTGAAAGGCCTGGATGGCATCCAGGGTCCTGTTTATGTGGGAACTGGTTGTTGCTTCAATAGGCAAGCTTTATATGGGTATGATCCCGTTTTGACCGAGAAAGATTTGGAACCTAATATCATTGTTAAGAGTTGTTGTGGTCCAAGAAAGAAGGGTAAAAGTGGAAATAAGAAGTATGTCGACAAAAAGAGGGCGTTGAAAAGAACTGAATCTACCATACCAATCTTCAATGTGGAAGACATTGAGGACGGTGTTGAAGGATATGATGATGAGAGATCACTCCTCATGTCTCAGAAGAGCTTGGAGAAGCGCTTCGGCCAGTCTCCAGTTTTTATTGCAGCAACTTTCATGGAACAGGGAGGGATTCCACCTTCAACGAATCCCGCTACTCTTCTAAAGGAAGCCATCCATGTTATCAGCTGTGGATATGAAGACAAGACAGATTGGGGCAAAGAGATTGGATGGATCTATGGCTCTGTTACGGAAGATATTTTAACTGGATTCAAGATGCATGCCCGTGGTTGGATTTCAATCTATTGCATGCCTCCTCGGCCAGCATTCAAGGGGTCTGCTCCCATCAATCTTTCTGATCGGTTGAACCAGGTGCTTCGATGGGCCCTGGGTTCAATTGAGATTTTACTGAGCAGGCATTGTCCCATCTGGTATGGTTACAACGGGAGACTAAAGCTTTTGGAGAGAATAGCATACATCAATACTATTGTCTACCCACTTACTTCAATCCCTCTGTTAGCTTATTGTATTCTTCCTGCGTTCTGTCTTCTTACTGGAAAATTCATCATTCCAGAGACGTTCTATATTGTATTTTTAGTTCAAATCGTGTCACTCTTAATGTTGGCTCTTCTGTTGCATTTCGTCTGTTTCCATACGTCTGATATAAGCAACTTTGCTAGCATGTGGTTCATTCTTCTCTTCGTATCCATCTTTGCCACTGGAATCCTTGAACTCAGATGGAGTGGAGTCAGCATTGAAGACTGGTGGAGGAATGAGCAATTCTGGGTCATTGGGGGTACTTCAGCTCATTTGTTTGCTGTCTTCCAAGGGCTCTTGAAAGTGCTTGCTGGAATTGATACCAACTTTACTGTCACTTCTAAGGCATCTGATGAGGATGGTGAATTTTCCGAACTCTACGAGTTCAAATGGACATCTCTGCTCATCCCTCCCACCACAGTAATTATTGTGAATATGGTAGGTATTGTGGCTGGTGTTTCCTATGCCATTAACAGCGGGTACCAGTCATGGGGTCCTCTCTTTGGCAAGCTCTTCTTCGCATTATGGGTCATTGTCCATTTGTACCCGTTCCTCAAAGGTTTGCTGGGTCGGCAAAATCGTACTCCGACAATTGTCATTGTGTGGTCCATTCTCCTTGCTTCTATATTCTCCTTACTCTGGGTGCGGATCGACCCATTCACATCTGATGCTGCCAAAGCTGCAGCGAGAGGTCAATGTGCTACAGAGTGCTTTGGAAGCAGACAAGATCAATTCCCTTCAGGAAATTTTTTTGTCGCCGTGAGTGAAGGATTGTGGGATAATGGCGCAGCCTGTGGGCGAAGCTACAGATTGAGGTGTTTGAGTGGTAAAAGTAAACCATGCAAAGATGGTTATATAGAGGTTGTGGTGGTTAATTTATGTCAAAAATCTCCATGTCCATCTACTCTTCTCATGTCAAACGATGCCTTTGCTGCTATTTCCCGCATCCGTAACACACGGGTCAATGTTGAATTTACACCGTAA 3717 44.39 MEANAGMVAGSYKRNEIVRIRHDSDGGVSLSKSLLRLELCISTIWLSLLTFFVVDLGDRVCLFAPKPLKNLDGQICQICGDTVGLTASGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYSQGNSNARRKWRGEDADLSSSARHESRQPIPLLTNGQPISGEIPATPDNQSVRTTSGPLGPSEKNSLNYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNLMQVTSRYTEGKGDIEGTGSNGEELQMADDGRQPLSRVVPISSSHLTPYRVVIILRLIILGFFLQYRVSHPVKDAYGLWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLTLRYDRDGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRVNALVAKAQKMPEEGWTMQDGTPWPGNNSRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAFGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEKDLEPNIIVKSCCGPRKKGKSGNKKYVDKKRALKRTESTIPIFNVEDIEDGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPLTSIPLLAYCILPAFCLLTGKFIIPETFYIVFLVQIVSLLMLALLLHFVCFHTSDISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGEFSELYEFKWTSLLIPPTTVIIVNMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSDAAKAAARGQCATECFGSRQDQFPSGNFFVAVSEGLWDNGAACGRSYRLRCLSGKSKPCKDGYIEVVVVNLCQKSPCPSTLLMSNDAFAAISRIRNTRVNVEFTP 1238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52071896 52079717 + BLOR01381 Blo01g01381 55821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01381 1238 CDD mRING-HC-C4C4_CesA_plant 74 124 - -
Blo01g01381 1238 PANTHER CELLULOSE SYNTHASE 59 926 - -
Blo01g01381 1238 Pfam Cellulose synthase 392 943 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo01g01381 1238 MobiDBLite consensus disorder prediction 126 222 - -
Blo01g01381 1238 Pfam Zinc-binding RING-finger 66 143 IPR027934 -
Blo01g01381 1238 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 549 687 IPR029044 -
Blo01g01381 1238 PANTHER CELLULOSE SYNTHASE 939 1148 - -
Blo01g01381 1238 MobiDBLite consensus disorder prediction 160 174 - -
Blo01g01381 1238 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1141 1238 IPR007112 -
Blo01g01381 1238 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 939 1148 - -
Blo01g01381 1238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 149 IPR013083 -
Blo01g01381 1238 Pfam Lytic transglycolase 1164 1236 IPR009009 -
Blo01g01381 1238 SUPERFAMILY Barwin-like endoglucanases 1141 1236 IPR036908 -
Blo01g01381 1238 SMART dpbb_1 1163 1236 IPR007112 -
Blo01g01381 1238 MobiDBLite consensus disorder prediction 175 221 - -
Blo01g01381 1238 Gene3D - 1131 1237 IPR036908 -
Blo01g01381 1238 SUPERFAMILY RING/U-box 65 148 - -
Blo01g01381 1238 Coils Coil 490 510 - -
Blo01g01381 1238 SUPERFAMILY Nucleotide-diphospho-sugar transferases 406 916 IPR029044 -
Blo01g01381 1238 ProSiteProfiles Zinc finger RING-type profile. 76 122 IPR001841 -
Blo01g01381 1238 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 59 926 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01381 Blo-Chr1:52071896 Blo06g00601 Blo-Chr6:28735117 0 dispersed
Blo01g01381 Blo-Chr1:52071896 Blo12g01081 Blo-Chr12:28512601 0 wgd
Blo01g01381 Blo-Chr1:52071896 Blo18g00037 Blo-Chr18:255200 2.71E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01381 K10999 - vvi:100254408 2064.27