Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01383 ATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGCAAAACTGCTGTTTTTGTTCTGTCATCTCTTCAACAAATTGATCCAGTGCCAGGTCAAGTTTCTGCTCTTGTTCTGTGCCATACAAGGGAGTTAGCATATCAGATTTGTCACGAGTTTGAAAGATTCAGCACATACCTGGTCGATCTTAAGGTTGCTGTCTTCTATGGAGGTGTGAGTATCAAAATTCATAAGGATTTGCTTAAAAATGAATGCCCACATATTGTTGTTGGAACACCGGGGAGAATATTGGCACTGGCAAGAGATAAGGATCTTTCTTTAAAGAATGTTAGGCATTTTATCCTGGACGAGTGTGACAAAATGCTCGAGTCTCTTGACATGAGAAGAGATGTCCAGGAGATTTTCAAGATGACTCCACACGATAAACAAGTAATGATGTTTTCTGCCACCCTCAGCAAAGAGATCCGCCCAGTTTGTCAGAAGTTTATGCAAGATGTAATTGATGATGTGTCAATGCTTGACGTGACTTGTAATTATCTGCAAAGACACGATGTTTGGACCACCACCTTGATGCCAGTGCTGGCTATTTCATTCATGTCCTACCCAATGGAAATTTATGTTGATGACGAAGCAAAATTGACGTTGCATGGTCTTGTTCAGCACTACATCAAGTTGACTGAGATGGAGAAAAACCGCAAGTTGAATGATCTACTTGATGCATTGGACTTTAATCAAGTTGTTATTTTTGTCAAAAGTGTAAGCAGAGCTGCAGAGTTGGACAAGTTACTCGTGGAATGTAATTTCCCTTCAATATGCATCCATTCAGGCATGCCTCAGGAAGAAAGGTTGACAAGGTACAAAGGTTTTAAGGAGGGGCATAAGAGGATTCTTGTCGCCACAGATTTAGTTGGTAGGGGCATTGACATTGAGCGTGTGAACATTGTCATCAATTATGACATGCCGGATTCTGCCGATACTTACCTGCATAGGGTTGGGAGGGCTGGTAGGTTTGGTACCAAAGGCCTAGCAATAACATTTGTGTCATCTGCTGCTGATTCTGATATTCTCAATAATGTTCAAGAAAGGTTTGACGCAGATATCCAGGTCCTTCCTGAGCAGATTGATACCTCGACATACAGCGAGACAATCCAATCCGACAAATTCTTGGGCGGGAGGAGAGGGTTCATCAGGGCCATCAGCAAACAGCCTGGTTGA 1209 42.27 MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLVDLKVAVFYGGVSIKIHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFMQDVIDDVSMLDVTCNYLQRHDVWTTTLMPVLAISFMSYPMEIYVDDEAKLTLHGLVQHYIKLTEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDILNNVQERFDADIQVLPEQIDTSTYSETIQSDKFLGGRRGFIRAISKQPG 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52119211 52121883 - BLOR01383 Blo01g01383 55823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01383 402 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 167 IPR014001 -
Blo01g01383 402 Gene3D - 1 169 IPR027417 -
Blo01g01383 402 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 15-RELATED 1 375 - -
Blo01g01383 402 SMART helicmild6 255 336 IPR001650 -
Blo01g01383 402 CDD SF2_C_DEAD 216 345 - -
Blo01g01383 402 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 231 376 IPR001650 -
Blo01g01383 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 348 IPR027417 -
Blo01g01383 402 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 375 - -
Blo01g01383 402 Gene3D - 212 380 IPR027417 -
Blo01g01383 402 SMART ultradead3 1 180 IPR014001 -
Blo01g01383 402 Pfam DEAD/DEAH box helicase 2 153 IPR011545 GO:0003676|GO:0005524
Blo01g01383 402 Pfam Helicase conserved C-terminal domain 229 336 IPR001650 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01383 Blo18g00029 CCT
Blo01g01383 Blo17g00022 CCT
Blo01g01383 Blo18g00029 ECH
Blo01g01383 Blo17g00022 ECH
Blo01g01383 Blo12g01079 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01383 Blo-Chr1:52119211 Blo18g00029 Blo-Chr18:213883 2.79E-107 dispersed
Blo01g01383 Blo-Chr1:52119211 Blo12g01079 Blo-Chr12:28496511 0 wgd
Blo01g01383 Blo-Chr1:52119211 Blo17g00022 Blo-Chr17:127366 0 wgd
Blo01g01383 Blo-Chr1:52119211 Blo18g00028 Blo-Chr18:211468 3.71E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01383 K12812 - csv:101217346 637.876