Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01386 ATGATGGTTTGTTCGGAAGCAACCCGCGAAAGCGTTTCTGTGCGCCAAGTGGCAGGTGGTATGCATCCATCGAGAGGTCACTGTCTATGCACTGAGCGAGGAAATGGCACTGGTATCGCTCTTTTTTCTGCAAATCATCTGGTTTGGCCAGGAGTAGTTGTTGGTTGTCTGAAATTGCTTGATTTAGTTGCGTTTTCTGATGAAAAACTAGCACTAACTGAAATTTTTTTTACCATTGAGCAGGTGAAGCTTTTATTGCAACAAGCACTACTTTCCATCGACAACTCATTTAAATCGACTGTACATGAACCATATTTCTCCACTTCTGATTTTCTTCTCCAACACACCTCCATTTCCCACGTACTTACGGCCTCTGCAACTCGCTCTATCTCTCCCTCTAAGAAATGGTACAATCAAGGAAGTTCAGAGGTGTCAGGCAGCGGCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCACCCGCTACTGTATGCACACCCACTTCCACTCCATTATTACCAGCTTAGTTCTTAATATAATCTTTACTGTAATAAATAGGAAGAGAAGGGTATGGCTTGGGACGTTTGAGACGGCAGAGGCAGCGGCTCGGGCATATGACCAAGCGGCTATATTGATGAACGGCCAAAACGCCAAGACCAATTTTCCTAACTCAAACAATCAAAATGAAGACCAAAAGAATGGGGATGGATCTTCATTGTCACCAAAGGAACTTTCAGAGCTTCTAAGCACAAAGCTGAGAAAATGCTGCAAAGACCCATCTCCCTCCCTCACATGCCTGAGGCTGGACAGCGATAATTCTCACATTGGGGTGTGGCAGAAGCGTGCCGGAGCTCGTGCAGCCTCCAATTGGGTCATGAGGATTGAGCTCGGGAAGAAAAATTCACATCACTCCGAGATTGAGTTGCCATTGCCAACCAGAGAATTGAAGAGTGGAATGGTTGAAGGCGAAAGCGAAATGGATGAGGAGGACAGAATTGCAATGCAAATGATCGAGGAGTTGCTCAGTTGGAATTGTCCAGAAGAGAAGGGTAGTCTTCCCCATCTGAGTTGCTGA 1071 46.22 MMVCSEATRESVSVRQVAGGMHPSRGHCLCTERGNGTGIALFSANHLVWPGVVVGCLKLLDLVAFSDEKLALTEIFFTIEQVKLLLQQALLSIDNSFKSTVHEPYFSTSDFLLQHTSISHVLTASATRSISPSKKWYNQGSSEVSGSGSGAPGCQKFATRYCMHTHFHSIITSLVLNIIFTVINRKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPNSNNQNEDQKNGDGSSLSPKELSELLSTKLRKCCKDPSPSLTCLRLDSDNSHIGVWQKRAGARAASNWVMRIELGKKNSHHSEIELPLPTRELKSGMVEGESEMDEEDRIAMQMIEELLSWNCPEEKGSLPHLSC 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52152465 52153836 - BLOR01386 Blo01g01386 55826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01386 356 SMART rav1_2 181 227 IPR001471 GO:0003700|GO:0006355
Blo01g01386 356 Gene3D AP2/ERF domain 156 222 IPR036955 GO:0003700|GO:0006355
Blo01g01386 356 ProSiteProfiles AP2/ERF domain profile. 126 221 IPR001471 GO:0003700|GO:0006355
Blo01g01386 356 Pfam AP2 domain 184 213 IPR001471 GO:0003700|GO:0006355
Blo01g01386 356 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 186 346 - -
Blo01g01386 356 SUPERFAMILY DNA-binding domain 184 223 IPR016177 GO:0003677
Blo01g01386 356 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 186 346 - -
Blo01g01386 356 MobiDBLite consensus disorder prediction 215 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01386 Blo12g01078 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01386 Blo-Chr1:52152465 Blo10g00517 Blo-Chr10:12050628 5.85E-12 dispersed
Blo10g00571 Blo-Chr10:16821112 Blo01g01386 Blo-Chr1:52152465 2.16E-46 transposed
Blo01g01386 Blo-Chr1:52152465 Blo12g01078 Blo-Chr12:28493030 1.95E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11915 PF00847 AP2 2.10E-06 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01386 - - mcha:111006480 228.409