Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01390 ATGGAAATGGAAAATCCGAGTTTCTGTCGTTTCCTTATTCTGCTCTATTTCTCTGCTATGCTTCTGAGTGAAACATGCTTCGCCCTTGTTCAAAACATAGGAACAATCGCTCTGGGGTTTCAGACTTCTCAGATGACCTGGATTGATGACGCCGGTCAGTTTCTATTCTCAAACAATTCCGAGTTCACGATGGGGTTCATCTCTACCTCAGACGTCACCTTGTTTCTTCTAGCCGTAATCCACATTAGCAGTAATGGCAAAACTGTAGTTTGGTCCACCGAGACTGCAGGGAAGGGAGTTTCCGCCATGGAATTGCAGAGCTCGGGGAATATGGTGTTGCTAGGGAAGGATTCGAGAGTAATATGGCAGAGTTTTAGCCATCCGACCGATACCCTTTTATCGAATCAGGATTTTACTGAAGGAATGAGACTTGTTAGCGATCCGGATGGGAATAATTTGACCTATTTTCTGGAAATTAAGGCTGGTGAATTGATTCTATCTGCAGTGTTGGGAAATTATGGCTTCATCTCTTTCCATTACCTTCAGTTTTCAGGATTGGCTATGGCTTCTCCGACGAAAATACCAGAAAACACGTGCGAAACCCCGATGCCTTGCGGACCAAATTTCGTATGTTATAGCTCCACCAAATGTCAGTGCCCTTCGGTTCTTAGCTCCCATCCGAACTGCCAGACGGGGATTGCCGAGCCGTGTAATGCTTCGAATGTCGGAGCGGAGCTTGTGAATGTCGGAAATGGGATTGATTATTTTGCTCTTGAATATGTTAATCCTTCTCTAAGAACTGATTTGGAAGGCTGCAAAAGTTCTTGCCTTGCTAACTGTTCTTGTCTGACTTTGTTCTTCCAGAACAGCTCAGGTCATTGTTACTTGTTTGACGATGTTGGCGGCTTTCAAAAATCCAACAATGGCTCGGAACTGGTTTCGTATATAAAGGTCTCTAGTAATGGCGAGAGAGGAAGCAGCCATGGAGGGAGAGGAAGTAGAAAGCGCCTCTTACCTTTTATGGTGATCGCAGCCTTTGCTGCTGTACTTGTTTTTTCCGGCCTAGTTTATGCAGGGTTGCATCACTCGAGGAAGAAGAAGAAATCGAGGGAGAATTCCGCGGAGGAAAATTTCATCGAAGGTTTATCGGAGGGGCCTGTTCGATACAGTTTCCGAGATCTTCAAACTGCAACTGGTAATTTCTCGCTGAAGCTTGGCCACGGAGGATTCGGCTCGGTTTATCAAGGCATTCTTCCCAATGGAACTCGAATAGCTGTGAAAAAACTCGAACAGATGGGCCAAGGACAGAAGGAGTTTCGAGCAGAAGATCGGACCGCCTACGAGTATATGTCAAACGGGTCTCTAGATAAATGGATTTTCAGAAGAAACAATGATGACTTCTTCTTAGATTGGGAGACAAGATTCAACATAGCCTTAGGAACAGCTAAAGGGCTTGCTTACCTTCACGAAGAGTGCGACTCGAAGATAATCCACTGTGATATTGAGCCCGAGAATGTGCTTCTCGACGATAATTTCCATGCGAAAGTCTCCGATTTCGGCTTAGCCAGGGTAGTGAGCCGAGAGCAGAACCATGTTTTCACAACGATGAGGGGAACTCGAGGGTATCTTGCCCCGGAGTGGATCACAAACTACGCAATATCAGAGAAAAGTGATGTGTATAGCTATGGCATAGTGTTGCTAGAGACAATAGGAGGGAGGAAGAATTTCGACCCGTCCGAAACTTCTGAGAAATCTCATTTTCCGACCTATGCTTTCAAGATGTTGGAGGAAGGGAAACTCGGAGAAATCTTGGACTCGAAGATGTCGATCGATCCGAGCGATGATCGGCTCTTTGCAGCTGTTAAGGTTGCGTTATGGTGCATACAAGAAGAAGACACGAATCTCAGGCCTCCAATGACCAAAGTTGTGCAAATGCTAGAGGGTCTGTGCTCTGTTCCCCACCCTCGAACCCTGACTTTGCTCCGATCTCATATATTTTGGGGGTTTTTCAGATGGAGCAACGGTGAGCGGGCCTCTTCTGGACCGTCCAATTGCAATAGCGATACTTTTTGTCTCACTCTCCGGGCCCCCATAGAAGTTGCAAAGATAAGATGA 2115 46.05 MEMENPSFCRFLILLYFSAMLLSETCFALVQNIGTIALGFQTSQMTWIDDAGQFLFSNNSEFTMGFISTSDVTLFLLAVIHISSNGKTVVWSTETAGKGVSAMELQSSGNMVLLGKDSRVIWQSFSHPTDTLLSNQDFTEGMRLVSDPDGNNLTYFLEIKAGELILSAVLGNYGFISFHYLQFSGLAMASPTKIPENTCETPMPCGPNFVCYSSTKCQCPSVLSSHPNCQTGIAEPCNASNVGAELVNVGNGIDYFALEYVNPSLRTDLEGCKSSCLANCSCLTLFFQNSSGHCYLFDDVGGFQKSNNGSELVSYIKVSSNGERGSSHGGRGSRKRLLPFMVIAAFAAVLVFSGLVYAGLHHSRKKKKSRENSAEENFIEGLSEGPVRYSFRDLQTATGNFSLKLGHGGFGSVYQGILPNGTRIAVKKLEQMGQGQKEFRAEDRTAYEYMSNGSLDKWIFRRNNDDFFLDWETRFNIALGTAKGLAYLHEECDSKIIHCDIEPENVLLDDNFHAKVSDFGLARVVSREQNHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGIVLLETIGGRKNFDPSETSEKSHFPTYAFKMLEEGKLGEILDSKMSIDPSDDRLFAAVKVALWCIQEEDTNLRPPMTKVVQMLEGLCSVPHPRTLTLLRSHIFWGFFRWSNGERASSGPSNCNSDTFCLTLRAPIEVAKIR 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52170977 52173415 - BLOR01390 Blo01g01390 55830

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01390 704 ProSiteProfiles PAN/Apple domain profile. 237 320 IPR003609 -
Blo01g01390 704 SUPERFAMILY Protein kinase-like (PK-like) 381 647 IPR011009 -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 446 679 - -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 167 442 - -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 167 442 - -
Blo01g01390 704 Gene3D Transferase(Phosphotransferase) domain 1 451 651 - -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 86 168 - -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 85 - -
Blo01g01390 704 Gene3D - 28 160 IPR036426 -
Blo01g01390 704 Pfam Protein kinase domain 447 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01390 704 PIRSF SRK 80 156 IPR024171 GO:0004674
Blo01g01390 704 PIRSF SRK 166 445 IPR024171 GO:0004674
Blo01g01390 704 PIRSF SRK 445 665 IPR024171 GO:0004674
Blo01g01390 704 PIRSF SRK 7 98 IPR024171 GO:0004674
Blo01g01390 704 SMART blect_4 20 128 IPR001480 -
Blo01g01390 704 Pfam D-mannose binding lectin 80 138 IPR001480 -
Blo01g01390 704 ProSitePatterns Protein kinases ATP-binding region signature. 405 428 IPR017441 GO:0005524
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 86 168 - -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 85 - -
Blo01g01390 704 CDD PAN_AP_plant 267 319 - -
Blo01g01390 704 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 145 IPR036426 -
Blo01g01390 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 446 679 - -
Blo01g01390 704 Gene3D Phosphorylase Kinase; domain 1 360 450 - -
Blo01g01390 704 ProSiteProfiles Bulb-type lectin domain profile. 1 126 IPR001480 -
Blo01g01390 704 ProSiteProfiles Protein kinase domain profile. 399 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01390 - - - csin:114293591 798.505
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01390 Blo18g00024 CCT
Blo01g01390 Blo18g00024 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01390 Blo-Chr1:52170977 Blo10g00572 Blo-Chr10:16907727 0 dispersed
Blo07g00039 Blo-Chr7:658419 Blo01g01390 Blo-Chr1:52170977 3.34E-18 dispersed
Blo01g01390 Blo-Chr1:52170977 Blo18g00024 Blo-Chr18:191418 5.81E-43 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g485 Blo01g01390 . Bda01g00747 . Bpe02g01248 Bpe02g00561 . . . Cmo12g00289 . . Car09g00401 Car12g00321 . Cpe07g00298 Cpe06g00340 Bhi04g00947 . . . . . Lcy13g1792 Cla05g01737 . . . . . . Cone4ag1783 Cone7ag1698 . . Lsi04g02129 Csa03g04335 Chy04g00367 Cme03g01614 . Blo18g00024 Bda01g01002 Bda13g01262 Bpe14g00581 . Bma01g01276 Bma02g00024 . . Cmo09g00467 Cma09g00458 Cma12g00340 . . . . Bhi09g02238 . . . . Mch11g0555 . Cla08g01336 . . . . . . Lsi08g01207 . Chy03g01118 Cme04g00409
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001479 3 3 3 4 3 2 2 2 2 2 2 2 2 2 1 2 2 7 2 2 2 2 2 2 1 2 1 2 2 2 68
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84110 PF00069 Pkinase 3.70E-31 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01390 Blo_Chr01 FPKM 2.678853 2.485031 4.747698 4.395445 8.908477 7.284426 10.545145 3.272277 3.373152 3.565145