Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01404 CTTGACCATATTTTTCTCGCATGTTCAGGAATTCTGATGGAAAATGAAGATCATAGCAGAGATCCTCATAAGAAAATGCTCATAGCTCTTGTTATTGTTTGCGCTTCACTTGCTACTATCTTATTTTCCATTCTTTCTCTCTGGTTATATCGTAGAAGACGCTCTCTAAAATCGGTTAAGAAAAATGTTGAGAGCTCAGATGCTGAGAAAGGCCTCGGATTAGTGCCATTTCTGGGAAAATTCAATTCGGTGAGGATGGTGGGGAAGAAGGGATCTGTTTCGGTAATTGATTACAAGCTACTAGAGAAAGCTACAGACAATTTTAGCGAGAGTAACGTTTTGGGTGAGGGCGGATTTGGTCGTGTTTACAAGGCGCAATTGGATGAGAACTTGCACGTTGCGGTCAAGAAACTGGGGTGCGGTGGTGTAGATGCTGAGAGAGAATTCGAGAACGAAGTGAATTTGTTAAGCAAAATTCAGCATCCAAATATTATTGCCCTTCTGGGTTGCGCTCTTCATGGCGAATCCAGGCTTTTTGTTTATGAATTGATGGAGAACGGATCCCTTGAAACGCAACTCCATGGACCTTCTCACGGATCAGCTCTGTCGTGGTATACACGGATGAAGATCGCCCTCGATTCTGCACGAGGTTTAGAGTATCTGCATGAGTACTGCCATCCAGCAGTGATCCACAGAGATCTGAAATCATCTAATATTCTTTTGGACGCCAACTTTAATGCCAAGCTGTCTGACTTTGGCCTTGCTGTAACTGATGGTTCTCAAAATAAAAATACCATCGAGCTCTCAGGGACCTTAGGATACGTTGCTCCAGAGTATCTGTTAGATGGTAAATTGACCGATAAAAGCGATGTTTATGCTTTCGGGATTGTTCTTCTGGAGTTGTTGCTGGGAAAAAAGCCAGTAGAAAAGCTGGCACCAGCTCAGTGCCAATCGATTGTCACATGGGCTATGCCTCAGCTCACTGACAGAACAAAGCTGCCTACCATTGTGGATCCTATTATTAAAGATACTATGGATTTGAAGCATTTGTATCAGGTGGCTGCAGTGGCCGTGCTGTGTGTGCAGCCAGAACCGAGCTACCGGCCTCTGATAACCGATGTGCTGCATTCTCTCATACCTCTTGTTCCCATCGAGCTTGGAGGGACGCTCAGATTAACAACACAACTTCCTAAATAA 1197 44.19 LDHIFLACSGILMENEDHSRDPHKKMLIALVIVCASLATILFSILSLWLYRRRRSLKSVKKNVESSDAEKGLGLVPFLGKFNSVRMVGKKGSVSVIDYKLLEKATDNFSESNVLGEGGFGRVYKAQLDENLHVAVKKLGCGGVDAEREFENEVNLLSKIQHPNIIALLGCALHGESRLFVYELMENGSLETQLHGPSHGSALSWYTRMKIALDSARGLEYLHEYCHPAVIHRDLKSSNILLDANFNAKLSDFGLAVTDGSQNKNTIELSGTLGYVAPEYLLDGKLTDKSDVYAFGIVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRTKLPTIVDPIIKDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRLTTQLPK 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52494234 52496824 + BLOR01404 Blo01g01404 55844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01404 398 CDD STKc_IRAK 114 381 - -
Blo01g01404 398 PANTHER OS01G0750732 PROTEIN 15 395 - -
Blo01g01404 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Blo01g01404 398 SUPERFAMILY Protein kinase-like (PK-like) 88 378 IPR011009 -
Blo01g01404 398 PANTHER BNAA04G14780D PROTEIN 15 395 - -
Blo01g01404 398 Pfam Protein tyrosine and serine/threonine kinase 111 345 IPR001245 GO:0004672|GO:0006468
Blo01g01404 398 Gene3D Phosphorylase Kinase; domain 1 79 183 - -
Blo01g01404 398 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Blo01g01404 398 SMART serkin_6 108 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01404 398 ProSiteProfiles Protein kinase domain profile. 108 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01404 398 Gene3D Transferase(Phosphotransferase) domain 1 184 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01404 Blo-Chr1:52494234 Blo05g00152 Blo-Chr5:1392783 1.22E-177 dispersed
Blo01g01404 Blo-Chr1:52494234 Blo10g00819 Blo-Chr10:25932028 3.35E-89 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84111 PF07714 PK_Tyr_Ser-Thr 6.50E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01404 - - fve:101299729 598.201