Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01412 ATGGAGGACAGAACTATTTTGTTTAAGAAGTACGAGATTGGAAGGTTACTTGGAAAAGGAACTTTCGCCAAGGTCTATTACGGAAAACACTTGAGCTCCGGCGAAAGTGTGGCGATTAAAGTTATTAGTAAGGATCAAGTGAAGAAGGAAGGCATGATGGAGCAGATTATCAGGGAGATTTCTGTTATGCGACTGGTTCGTCATCCTAATGTCGTCGAGCTCAGGGAGGTAATGGCTACCAAGGCTAAGATCTTTGTTATCATGGAATACGTCCGCGGAGGCGAGCTTTTTGCGAAGGTCGCGAAAGGAAAGCTTAAAGAAGATCAAGCGCGGAAATACTTTCAGCAATTGATCAGCGCCGTCGATTTCTGCCATAGCAGGGGAGTCTCTCACCGTGATTTGAAGCCGGAGAATCTGTTGTTGGACGAGAATGAGGACTTGAAGATTTCCGATTTCGGCCTTTCTGCACTGCCGGAACATCTACGGAAAGACGGTCTATTTCACACGCAGTGCGGTACTCCGGCGTATGTGGCCCCGGAGGTTCTGAGAAGAAAAGGCTACGCCGGCGAAAAAGCCGATTTGTGGTCCTGCGGTGTTATTCTCTATGTGCTTCTTGCAGGTTTTCTTCCCTTTCAAGATGAGAATGTTATGAACATGTACAAGAAGGTTTTCAAGGCTGAATTTGAATGTCCGCCGTGGTTTTCGACTGAATCGAAGCGGTTAGTCTCCAAACTCCTAGTCGTTGATCCTGAAAAACGGATAACAATTCCGGCGATTATGCGCGTTCCGTGGTTTCGCAGAAGCTTATCGAAGCCGCTGGCCTTTTCACCAATAGAAATTCCGGACAACAAACCGGAGGAGATAATCGACGGCGATATTCCTAAAATACCGACTCCGAAGTTTTTCAATGCCTTCGAGTTGGTCTCTTCAATGTCATCTGGATTCGATTTATCGAATCTGTTCGAAACCAAGAAGAAGACAGGGTCAATGTTCACGTCGAGGTGCTCGGCGGCTGCAATCATGACGAAGATCGAGGCGGTGGCGAAGGGGCTGAGCTTCAAAGTCTCCACGGTGAAGGATTTCAAGCTGAGATTACAGGGGCCATCGGAAGGAAGAAAAGGAAAGCTTTCGGTGACGGCAGAAGTATTCGAGGCGGCGCCGGAGGTAACCATCGTAGAATTCAAAAAGTCTTCCGGCGACACCTTAGAATACGCAAAGTTCTGCGAAGAAGACATTCGACCGTCACTGAAAGACATAGTCTGGACATGGCAAGGCGACTGCGTCTTTAACAGTAAAGCAGAACAATGA 1308 47.55 MEDRTILFKKYEIGRLLGKGTFAKVYYGKHLSSGESVAIKVISKDQVKKEGMMEQIIREISVMRLVRHPNVVELREVMATKAKIFVIMEYVRGGELFAKVAKGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEHLRKDGLFHTQCGTPAYVAPEVLRRKGYAGEKADLWSCGVILYVLLAGFLPFQDENVMNMYKKVFKAEFECPPWFSTESKRLVSKLLVVDPEKRITIPAIMRVPWFRRSLSKPLAFSPIEIPDNKPEEIIDGDIPKIPTPKFFNAFELVSSMSSGFDLSNLFETKKKTGSMFTSRCSAAAIMTKIEAVAKGLSFKVSTVKDFKLRLQGPSEGRKGKLSVTAEVFEAAPEVTIVEFKKSSGDTLEYAKFCEEDIRPSLKDIVWTWQGDCVFNSKAEQ 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52650189 52651496 + BLOR01412 Blo01g01412 55852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01412 435 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01412 435 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01412 435 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Blo01g01412 435 SUPERFAMILY Protein kinase-like (PK-like) 7 286 IPR011009 -
Blo01g01412 435 Pfam NAF domain 299 355 IPR004041 GO:0007165
Blo01g01412 435 PANTHER - 1 432 - -
Blo01g01412 435 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 432 - -
Blo01g01412 435 Gene3D Transferase(Phosphotransferase) domain 1 2 295 - -
Blo01g01412 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Blo01g01412 435 ProSiteProfiles NAF domain profile. 297 322 IPR018451 GO:0007165
Blo01g01412 435 CDD STKc_SnRK3 10 264 - -
Blo01g01412 435 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01412 435 Gene3D Kinase associated domain 1, KA1 297 422 - -
Blo01g01412 435 CDD CIPK_C 303 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01412 Blo-Chr1:52650189 Blo11g00700 Blo-Chr11:8260763 2.14E-176 dispersed
Blo01g01412 Blo-Chr1:52650189 Blo12g01056 Blo-Chr12:28344522 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84112 PF00069 Pkinase 2.20E-75 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01412 - - csv:101213773 702.59