Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01426 ATGTGTGCAGCACGTCTTCGTATCTTCCCAAATTTCATTCAACTTCGCCAGAAATCGAACTCCTCCGGTGAGCGAGTTGTTCTCCTCTCCTCTCTCCCCTGCGAAGTAGGAACTGATAATCAACTCTCGGTTTCTAGTCGGTTCTCGGTTCCTGCTTTATGGAACCGAGAATGGGTCCATGTTTTACTTTTTGGTTTATTGTCACTTTTTGATCTTCCTAGACATGATAGTGCTGAAACAATCCGCAGAGCTCTCAATTTGGGCGTGAATGTGAAAATGATCACTGACGATCAACTTGCTATTTCCAAGGAGACTAGCCGAAGACTCGGAATGGGGACGAACATGTACCCATCAGCTTCCTTACTAGGACAACACAAGGATGAAAGTATTGCTGGCTTTCTAGTAGAAGAGTTAATTGAAGAGGCAGTCGGGTTTACTGGAGTTTTTCCTGAACACAAGTATGAAATAGTGAAGAAATTGCAAGAGAGGAAGCACATTTGCGGAATGACAGGAGATGGTGTAAATGATGTTCCTGCTTTGAAGAAGGCTGATATTGGAATTGCAGTGGCAGATGTCACTGGTGCTGCACGAGGGGCTTCAGATATTGTTCTCACTGAACCTGGCTTCAATGTCATCATTAGTGCAGTGCTTACAAGCACATGGAACCGGTTCAAAATCGGAACCGAACCAAAATCGAGACTCGGGTCTGGTTCCTTGCGGTTCTGGTTCTGGTTCCTTACTCTTGGAACCGAGAACCGAATGGTCGGTTCCAAGAGGTCTGGAACCGAAACTAAAAACCAGTTTGCCCACCCCTACTTAAAACCCCCACAAATTCAAAACACAATTCAAATGAAATGA 858 44.87 MCAARLRIFPNFIQLRQKSNSSGERVVLLSSLPCEVGTDNQLSVSSRFSVPALWNREWVHVLLFGLLSLFDLPRHDSAETIRRALNLGVNVKMITDDQLAISKETSRRLGMGTNMYPSASLLGQHKDESIAGFLVEELIEEAVGFTGVFPEHKYEIVKKLQERKHICGMTGDGVNDVPALKKADIGIAVADVTGAARGASDIVLTEPGFNVIISAVLTSTWNRFKIGTEPKSRLGSGSLRFWFWFLTLGTENRMVGSKRSGTETKNQFAHPYLKPPQIQNTIQMK 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53058828 53060711 - BLOR01426 Blo01g01426 55866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01426 285 Gene3D - 71 207 IPR023214 -
Blo01g01426 285 SUPERFAMILY HAD-like 63 216 IPR036412 -
Blo01g01426 285 Pfam haloacid dehalogenase-like hydrolase 63 184 - -
Blo01g01426 285 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 141 222 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g01426 285 PRINTS P-type cation-transporting ATPase superfamily signature 87 97 - -
Blo01g01426 285 PRINTS P-type cation-transporting ATPase superfamily signature 65 76 - -
Blo01g01426 285 PRINTS P-type cation-transporting ATPase superfamily signature 193 205 - -
Blo01g01426 285 PRINTS P-type cation-transporting ATPase superfamily signature 170 189 - -
Blo01g01426 285 PRINTS H+-transporting ATPase (proton pump) signature 142 158 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g01426 285 PRINTS H+-transporting ATPase (proton pump) signature 170 186 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g01426 285 PRINTS H+-transporting ATPase (proton pump) signature 201 226 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo01g01426 285 PANTHER CALCIUM-TRANSPORTING ATPASE 63 220 - -
Blo01g01426 285 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 63 220 - -
Blo01g01426 285 Gene3D - 208 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01426 Blo-Chr1:53058828 Blo14g00667 Blo-Chr14:14446925 8.56E-89 dispersed
Blo01g01426 Blo-Chr1:53058828 Blo16g00851 Blo-Chr16:35845816 1.72E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01426 K01535 - csv:101221564 270.781