Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01427 ATGGCTCCTCAAACCTCCTCCTCCTCCTCCTCCTCCTTCGTGAATTGTTTCGTCTTTCTCTCTCTTTTTTTTTCCCCTGACCAAGTTTATGGCTTTGAAGGAAGAGACCGCACTTCAAACTCTCACCAACTTTATCATGCTCATCTTGAACTCGCTTCTCTGCTACCGTCCTCCACTTGCACTTCTTTCTTTGAACCAGATCCAAAGAAGGTGAGCTCTCTCGAGGTGGTGCACAAGCATGGGGCCTGCAATCCACACAAACAAGATGCACCAAATGCTCCTACAGCAAATGACGTTCTACTCCGAGACCAGGCTCGAGTCGATTTCATCCACTCCCGGCTTTCCAATGTCTCGGGAGATGGCTATTTGACGCTCTCAGAGGCTACCGCAGTTCCGGCTAGGTCTGGCGCGGATCTTGGCTCTGGCAACTACCTTGTCACTGTGGGTTTGGGCACTCCTAAAAAGAAACTTTCCCTCGTATTCGACACTGGCAGTGACCTCACTTGGACTCAATGCGAGCCTTGCCTCAAATTTTGCTACGACCAACAGGAACCGATCTTTGATCCCTCCGGCTCGTCTTCCTACAAAAACATCTCATGCTCTTCACCCTTCTGCTCCCAGCTTCAATCTGGAACTGGAACTCCACCTAGTTGTTATGCTTCTACATGTCTCTACGGCATTCAATATGGTGACCAATCCTTCTCCGTCGGATATTACGCTGAAGAAAAGCTCTCTCTTACAATAACCGATGTCTTTGATGACTTCCGATTTGGTTGCGGTCAAAATAACCGAGGCCTCTTTGGTGAAGCTGCTGGTATATTAGGCCTCGGCCGTAACAACGTTTCTTTTGTCCAGCAGACTGCACAAAAATATGGTCGACTCTTCTCTTATTGTCTACCATCAAGTTCTAGCTTAACTGGCCACCTCACATTCGGCGATAGAAGTGGCGTTGCTGTGAGATACACACCATTATCAAACACCTCTTTGGGTTCTAACTACTATCCACTAGATATTGAGGGAATAAGTGTCGGAGGTCACAAATTACCAATTCCAGGAACAGTTTTTACTGCAGCTCGCTCTATAATCGACTCCGGCACAGTGATCACACGATTGCCTCCTGCAGCGTATAGTGCCTTGAAGTCGGAGTTTCAAAGAGAAATGGCAGCCTATCCTAAAGCCCCAGCACTTTCAATACTCGATAACTGCTACAACCTGAAGGGTTACACCACCATCAAAGTCCCAGTAATAAGCTTTTTCTTCAGGGGCGGAGTGACAGTAGAGTTACACCCCAGTGGTATATTTTTGGCAGCGAGTCTGTCACAAGTTTGCTTGGCTTTTGCTGGAAATGGAGATCCAACAGACGTGGCAATATTTGGTAATACGCAGCAGAAAACATTAGAGGTTGTTTATGATGTTGGCGGGGGAAGAGTTGGGTTTGCTCCAGGAACCAGAACTGGCCAATTAATAATAACCACTAACATCATGGGCTATCTGAATTCAGTCCTGTCATGTTCGAGCCAGGTTCATGATGCCGATGAAGCACCAGTAAGCGGCGGTGGTCTCAGTTCAAATGGAAAGTTCAGCTATGGATATGCAAGTTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGTGTTGAAGGGGAAATAGTAGGCCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCACGAGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAGTCAGCTATAGCCGATGCATACAACAGCACAGACTCAGAATTTCTAAAATCAGAAAACAATCAGAACAGGGATGCTGGATCAACAGCTTCTACTGCTATTTTAGTCGGTGATCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCTGTTATATGTCGTGGTGGAAATGCAATTGCTGTCTCCCGAGATCACAAACCTGATCAATCAGATGAACGACAACGGATTGAGGATGCTGGAGGATTTGTGGTGTGGGCCGTAGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGCGCTTTTGGGGATAGGCTGTTGAAGCAATATGTTGTCGCTGATCCAGAAATTCGGGAGGAAAAGATCGATAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCCAACGAGGAGGCTGTTGCGATGATAAAACCAATTCAGGCACCGGAGGAGGCCGCGAAGAGGTTGATGCAGGAAGCATACCAGAAAGGCAGTGCTGATAACATTACCTGTGTGGTTGTTCGTTTTTTGGCCAATCAGGGCGCTTCCTCCTGCGAAACGTCTGGGTAA 2367 46.85 MAPQTSSSSSSSFVNCFVFLSLFFSPDQVYGFEGRDRTSNSHQLYHAHLELASLLPSSTCTSFFEPDPKKVSSLEVVHKHGACNPHKQDAPNAPTANDVLLRDQARVDFIHSRLSNVSGDGYLTLSEATAVPARSGADLGSGNYLVTVGLGTPKKKLSLVFDTGSDLTWTQCEPCLKFCYDQQEPIFDPSGSSSYKNISCSSPFCSQLQSGTGTPPSCYASTCLYGIQYGDQSFSVGYYAEEKLSLTITDVFDDFRFGCGQNNRGLFGEAAGILGLGRNNVSFVQQTAQKYGRLFSYCLPSSSSLTGHLTFGDRSGVAVRYTPLSNTSLGSNYYPLDIEGISVGGHKLPIPGTVFTAARSIIDSGTVITRLPPAAYSALKSEFQREMAAYPKAPALSILDNCYNLKGYTTIKVPVISFFFRGGVTVELHPSGIFLAASLSQVCLAFAGNGDPTDVAIFGNTQQKTLEVVYDVGGGRVGFAPGTRTGQLIITTNIMGYLNSVLSCSSQVHDADEAPVSGGGLSSNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYNSTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVVWAVGTWRVGGVLAVSRAFGDRLLKQYVVADPEIREEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIQAPEEAAKRLMQEAYQKGSADNITCVVVRFLANQGASSCETSG 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53080047 53091831 + BLOR01427 Blo01g01427 55867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01427 788 SMART PP2C_SIG_2 539 775 IPR001932 -
Blo01g01427 788 ProSiteProfiles Peptidase family A1 domain profile. 144 480 IPR033121 -
Blo01g01427 788 Pfam Xylanase inhibitor C-terminal 334 480 IPR032799 -
Blo01g01427 788 Gene3D Acid Proteases 316 487 IPR021109 -
Blo01g01427 788 Pfam Protein phosphatase 2C 557 768 IPR001932 -
Blo01g01427 788 PANTHER ASPARTYL PROTEASES 50 482 IPR001461 GO:0004190|GO:0006508
Blo01g01427 788 PANTHER ASPARTYL PROTEASE AED1 50 482 - -
Blo01g01427 788 Gene3D Acid Proteases 123 313 IPR021109 -
Blo01g01427 788 SUPERFAMILY PP2C-like 522 775 IPR036457 -
Blo01g01427 788 SMART PP2C_4 518 773 IPR001932 -
Blo01g01427 788 SUPERFAMILY Acid proteases 136 482 IPR021109 -
Blo01g01427 788 CDD cnd41_like 143 482 IPR033873 -
Blo01g01427 788 ProSitePatterns PPM-type phosphatase domain signature. 559 567 IPR000222 GO:0043169
Blo01g01427 788 Gene3D - 520 780 IPR036457 -
Blo01g01427 788 CDD PP2Cc 527 775 IPR001932 -
Blo01g01427 788 Pfam Xylanase inhibitor N-terminal 144 313 IPR032861 -
Blo01g01427 788 ProSiteProfiles PPM-type phosphatase domain profile. 528 775 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00131 Blo-Chr1:1790226 Blo01g01427 Blo-Chr1:53080047 5.45E-17 dispersed
Blo01g01427 Blo-Chr1:53080047 Blo09g00036 Blo-Chr9:503286 2.90E-109 dispersed
Blo17g00668 Blo-Chr17:17077808 Blo01g01427 Blo-Chr1:53080047 4.96E-24 dispersed
Blo18g00635 Blo-Chr18:10858196 Blo01g01427 Blo-Chr1:53080047 3.10E-23 dispersed
Blo02g01214 Blo-Chr2:44090193 Blo01g01427 Blo-Chr1:53080047 4.43E-13 transposed
Blo05g00376 Blo-Chr5:4505268 Blo01g01427 Blo-Chr1:53080047 6.69E-23 transposed
Blo11g00112 Blo-Chr11:853891 Blo01g01427 Blo-Chr1:53080047 1.07E-49 transposed
Blo01g01427 Blo-Chr1:53080047 Blo12g01039 Blo-Chr12:28238832 0 wgd
Blo01g01427 Blo-Chr1:53080047 Blo17g00260 Blo-Chr17:2646590 2.70E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01427 - - qsu:112039158 566.229