Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01442 ATGCTGAACCCTAGCTCGGCGGTTCTGTGGTATCGCGTCCCTCGCTCGGTGGTGGTGTTTCTTCGTAAATCTCCGTCGTTCTCGCGTCGCCTTGCCCGGTCCTCTCCGTCGGTCTCGCGTCGCCTCGCCGGTCCTCTCCTCGCCTTGCCTCTTCGACCAATTGGGGAGAAATGTGGAGATCTCTCCGAAAATCATCTCTCGGGCCCGATTCCTCAAGAATTTAGTCAGCTTCAGAATATGTTGTCCTTGAGACTGGAAAGCAACAATCTATCTGGGGATGTGATGTCTCTAATTAACTGCCTGAGTCTAACAGAATTGAACGTATCTTATAATAACTTGGTTGGTGTTATTCCGACTAGCAATAACTTCTCGAGATTCCTGTTTGACAGCTTTGTTGGAAATCCGGGTCTCTGCGGATATTGGCATAACTACCAATGCCTTGATTCTCGATCAATGGAGAGAGTTGCAATATCTAAAGCGGCAATCATTGGCATTGCTCTTGGTGGTCTTGTGATTCTTCTCATGATCCTTTTAGCTGCATTTCGACCAAACAAAGCAATTACATTTCCTGATGGATCAGTCGAAAAACCAGTTAATTTTTCAACTCCAAAGCTGGTGATTCTGCATATGAATATGGCACTTCATGTGTATGAAGACATTATGAGAATGACCGAAAACTTGAGTGAGAAGTATATAATCGGGTACGGAGCTTCAAGTACTGTCTACAAATGTGTACTCAAAAACTGCAAACCAGTGGCCATCAAGAGACTATACTCTCACTATCCTCAGAGCCTGAAGGAATTCGAAACCGAGCTCGAGACAGTTGGAAGCATCAAGCACAGAAATCTCGTCAGCCTCCAGGGCTATTCCTTCTCCCCCTATGGCAACCTTCTCTTCTACGGGTATATGGAAAATGGCAGTCTTTGGGATCTTCTTCACGGTCTGACGAAAAAGAAAAAACTTTGTTGGGACACTCGGCTGAAGATTGCACTGGGAGCGGCTCAAGGGCTTTCGTATCTACACCATGATTGCAGTCCACGCATCATCCACAGGGATGTCAAATCGTCCAATATTCTTTTGGACAAGGATTTTGAGCCTCATCTTACGGATTTTGGCATTGCCAAGATCTTATGCACATCGAAGACTTATACTTCTACTTACATTATGGGAACGATTGGCTATATTGACCCTGAGTATGCTCGAACCTCTCGACTCACGGAAAAATCCGATGTTTACAGCTACGGAATTGTTTTGCTTGAACTGCTGACGGGAAGAAAAGCTGTTGACAATGAGGCAAACCTCCATCATCTGATTTTATCAAAGACAGCCAACAATACTGTCATGGAAGCAGTCCATCCGGAGATTACTGCTACTTGTAAGGATCTTGGAGCAGTGAGGAAAGTTTTTCAACTTGCTCTTCTATGCACAAAGAGACAGCCGTTCGATCGTCCTACGATGCATGAAGTCACCCGTGTTCTTGGAAGTCTCGAGCCAACCTCGGCCCCGCCAACTTCGAAAATGCCTTGCTATGTGGACGAGTATGCAAATTTGAAAACTCCACACATGGATCAATGCCCGTCGATTAGTACATCTGACGCCCAGCTATTCCTCAAGTTTGGAGAGGGGTGTGCAGAACCGAATCAGTACCAAAGACTGGATTGGAACCGGCAGTTTTGGTACCGGTTCGGTGCAAGTTTATTTGGAATCAGACCAAATTTGGTTCTGTCTAGGTACCGACCGTTAGAACCGAAGGCACAAGGGGATGGCCGTTGGGGATCGATTAAATTTAGGGCACCCTCACACCCGCAAGTAGCTCTCGTCACTGCATTCGTCTCCCCTCCGGTGTCGGCGCTCCCGAGTCCCGAACTCCAGTCCCGACTCCTGACTTCATCACCCACTGCTCTCTCAAGTCTCAAGTCCCGAGCTCCAGTCTCGAGCTCTTGTCTCGACTTCGTCTTCGACGCTCTAGTCCCGACTCCGTCTCAGGTGCTTGCCCTTCCGACTTCCTTCGCCAGCGCGGTCATTCATGGAATCGAATACGCATATGGAGCTCACGAGTATTCAACAACTGGAATTTTCGAAGGGGAACCAAAGAAATGTGATGGATTCAAATTCAAAAAAAGTATTTTGATCGAAAAAATAGAGATAGAATCTGCAGAAGTGAGGAAAGTTATGGAGGAGTTTGCTCAAGTTTACAGAGGAAATGCTTATAACTTGATCACCCAGAATTGCAATCACTTCTGCAACGATGCTTGCCTTCTCCTCACCCGAAATCCAAACCCCAAGTGGATCAATCGCCTTGCTAGAATTGGTAACTAA 2319 46.66 MLNPSSAVLWYRVPRSVVVFLRKSPSFSRRLARSSPSVSRRLAGPLLALPLRPIGEKCGDLSENHLSGPIPQEFSQLQNMLSLRLESNNLSGDVMSLINCLSLTELNVSYNNLVGVIPTSNNFSRFLFDSFVGNPGLCGYWHNYQCLDSRSMERVAISKAAIIGIALGGLVILLMILLAAFRPNKAITFPDGSVEKPVNFSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSLKEFETELETVGSIKHRNLVSLQGYSFSPYGNLLFYGYMENGSLWDLLHGLTKKKKLCWDTRLKIALGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEPHLTDFGIAKILCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNEANLHHLILSKTANNTVMEAVHPEITATCKDLGAVRKVFQLALLCTKRQPFDRPTMHEVTRVLGSLEPTSAPPTSKMPCYVDEYANLKTPHMDQCPSISTSDAQLFLKFGEGCAEPNQYQRLDWNRQFWYRFGASLFGIRPNLVLSRYRPLEPKAQGDGRWGSIKFRAPSHPQVALVTAFVSPPVSALPSPELQSRLLTSSPTALSSLKSRAPVSSSCLDFVFDALVPTPSQVLALPTSFASAVIHGIEYAYGAHEYSTTGIFEGEPKKCDGFKFKKSILIEKIEIESAEVRKVMEEFAQVYRGNAYNLITQNCNHFCNDACLLLTRNPNPKWINRLARIGN 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53307194 53311465 - BLOR01442 Blo01g01442 55882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01442 772 SMART serkin_6 227 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01442 772 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Blo01g01442 772 Gene3D Ribonuclease Inhibitor 55 154 IPR032675 -
Blo01g01442 772 Gene3D Phosphorylase Kinase; domain 1 195 302 - -
Blo01g01442 772 SMART DUF862_2a 661 772 IPR008580 GO:0008233
Blo01g01442 772 Pfam PPPDE putative peptidase domain 672 771 IPR008580 GO:0008233
Blo01g01442 772 ProSiteProfiles PPPDE domain profile. 646 772 IPR008580 GO:0008233
Blo01g01442 772 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 60 535 - -
Blo01g01442 772 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 60 535 - -
Blo01g01442 772 Pfam Protein kinase domain 230 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01442 772 SUPERFAMILY Protein kinase-like (PK-like) 205 493 IPR011009 -
Blo01g01442 772 CDD STKc_IRAK 233 496 - -
Blo01g01442 772 Gene3D Transferase(Phosphotransferase) domain 1 303 506 - -
Blo01g01442 772 Gene3D PPPDE domains 670 772 IPR042266 -
Blo01g01442 772 SUPERFAMILY L domain-like 60 135 - -
Blo01g01442 772 ProSiteProfiles Protein kinase domain profile. 227 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01442 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01442 Blo-Chr1:53307194 Blo07g00462 Blo-Chr7:9818018 0 dispersed
Blo01g01442 Blo-Chr1:53307194 Blo12g01031 Blo-Chr12:28191189 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84113 PF00069 Pkinase 1.40E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01442 K20718 - pop:18100640 801.971