Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01450 ATGGCTTCTAAAGACTTTGTTTTCGAACGATTTCAAGAAGCAATCTTTCACCAACATGTTCTGCTGACCCTCTTTGGCCATCCTCTGATCAAGGAAGCTGAAAGGGAAAGCGTTGGACGGACATCCAACTCAGGCCAGATGAGTTATAGAAGCTCCAAGAGTAAAGGAGGGAAGGCGAAGGAGGTGATAGATATGGGAAAGCTTCACAAGATGAAGCAGGAAAAGCTTGACCCGGTAGCAAGTGAGGAATCTTCTCTGTTTCGTATGATGCTTGGTCTTTCCTTCGATAAAGATTCTAATTTTGATGGGGCTGAGACAAGATGGGTGTTTTTTTATATTGTGCAGGTGAAGGTTTACCAAGGCAGAAAAACCCTAGCACATGCTTTAAACATGATGGTGGAAGAAATGAATATCCCAACAACAGTATTCTTGAAGCTAAACAAAGAGAAGGTTATTATCCTAGTGTTGGCAACAAAGCCTAATGGAAATTATTTCGGGAGCCCAGATATGGGTGACTGGCATCCAACACATAACTTGGTGGCGAAGGAAATTGAAAAAGTGAATGAGATTAAGATTGATCTAAATGTCAATCACACGATGAACTTCCAAGACTGGGTAGAGAAGAACTTGAGAAGAAGTGAACTTGTCATTGAGTTGAAGAAAATTTTTGAAGAATTGAATATTAATTGCAGCAACTTATACAGAGACAAGATCGATTGGAAGAGATTTTTCACAAATGCGTTCAAGACTCTAACTCCAAACATGATGCTATTATGCCTAGAGTTTAATTGGCTTTTTCCAACTCAATCAGACGACAATCAGAAGCACATTACAACGCTTGTTTCTAGCTTCAACCAGCACACTCCTTCTAGCTCCAAGAATGAGGATCTTTATACTAATGCTCATGAAAGCACTGAGATAAAGAAAATTGCAATATCAGCCACCATTGAGAAAGAAAACGAAAGTGGAGATTTCGACCTCGATGACCTGCGAATTGACGTAGACGTCACAGATGAGATAGGAGGCAATGATGAGTTAACAACTGAAAACATGAATCAAATTTCAGGTATTCATGTTCCAAGTTTAAAGAAAGTTCAACTCCCAATTGATTTCAGATGGAGTAGTGACCCTAGCATCATTTTAGGTGTTGAGGTTGCACTTGTTGCTTCAATACCCATTCAGTTGAAGGATCTTCAAGTTTTTACTGTTATTCGTGTTATTTTTCAACTTGCTGAAGAGATCCCCTGCATTTCAGTTATTGTTTTTGCTTTATTAACAGAACTGGAACCAAAAACTGAATATAGTCTAAAAGTTGTTGGTGGACGTTTAACTGTCATTCCCAGAATATCCGATATAATTGAAGATATGGTACATACGATACTCACTGTTATGCTCCAGTACCCCATTTGTCTAAAGAACTACGCCAAGGAGAATATCATAATTGACCACTACTTCAATAGAATCATCTCTTTGATGAAGCATTCTGGAAAGGATGTAACAGAGATTGAAGTAAATCCTGATGGTACTTGGCGCATGAAAGCAAAAACAAAAAGTGAATACAAGGATTTGGGCGATCTTAGTCAGTGGTGCCTACCCGATGGAGCAATTTGGGCTCCGAACGAGGTAGAACTTAAATCTTTCGGTGGAAGTCTTAAAGCAAACTAA 1665 39.1 MASKDFVFERFQEAIFHQHVLLTLFGHPLIKEAERESVGRTSNSGQMSYRSSKSKGGKAKEVIDMGKLHKMKQEKLDPVASEESSLFRMMLGLSFDKDSNFDGAETRWVFFYIVQVKVYQGRKTLAHALNMMVEEMNIPTTVFLKLNKEKVIILVLATKPNGNYFGSPDMGDWHPTHNLVAKEIEKVNEIKIDLNVNHTMNFQDWVEKNLRRSELVIELKKIFEELNINCSNLYRDKIDWKRFFTNAFKTLTPNMMLLCLEFNWLFPTQSDDNQKHITTLVSSFNQHTPSSSKNEDLYTNAHESTEIKKIAISATIEKENESGDFDLDDLRIDVDVTDEIGGNDELTTENMNQISGIHVPSLKKVQLPIDFRWSSDPSIILGVEVALVASIPIQLKDLQVFTVIRVIFQLAEEIPCISVIVFALLTELEPKTEYSLKVVGGRLTVIPRISDIIEDMVHTILTVMLQYPICLKNYAKENIIIDHYFNRIISLMKHSGKDVTEIEVNPDGTWRMKAKTKSEYKDLGDLSQWCLPDGAIWAPNEVELKSFGGSLKAN 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53576241 53580110 - BLOR01450 Blo01g01450 55890

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01450 554 MobiDBLite consensus disorder prediction 36 57 - -
Blo01g01450 554 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 352 469 IPR045050 GO:0008289
Blo01g01450 554 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 352 469 - -
Blo01g01450 554 MobiDBLite consensus disorder prediction 39 53 - -
Blo01g01450 554 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 426 512 IPR013083 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01450 - - - nnu:104590807 163.696
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01450 Blo12g01027 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01450 Blo-Chr1:53576241 Blo12g00312 Blo-Chr12:18396984 7.10E-48 dispersed
Blo01g01450 Blo-Chr1:53576241 Blo12g01027 Blo-Chr12:28161603 4.47E-22 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g144 Blo01g01450 Blo12g01027 . Bda03g00130 . . Bma04g00265 . . . Cma01g01705 . . . . . . . . . . . . . Cla05g01618 Cam05g1731 Cec05g1736 Cco05g1792 Clacu05g1720 Cmu05g1604 Cre05g1731 Cone4ag1693 . . . Lsi04g01394 . . . . . . . . Bpe04g00114 . . . Cmo01g01806 . . . Car01g01323 . . Cpe02g00286 Bhi09g03090 . . . . . . . . . . . . . . . . Cme07g00186
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015414 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01450 Blo_Chr01 FPKM 12.739565 15.027148 3.501812 3.359483 18.010851 14.756807 16.692215 2.71774 4.323164 4.125672