Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g01452 | ATGGCAGATCCAGGAGAGATTTTTCCCTACGACGACCCCTCCTACTACGGCCTAAGCACCGATTACGTTCTCAATATGATGACTGATCAGAACCCTACCTTCGCCAATTTGGCGAACTTGGCCGGTCCTTCTTCTAGTTCCGTCCCCACGCTAGAAGCGGAGGGAGAACTCGGGGACTCCGACATTCTATTTGATCAGTCCGGATGGGAATGGCTCAATTATCAACCTATCTCCGGCGGGAGTTCCGCTGCTGGTCCTTCAAAGGTCGACGGAGAGGGTTGTGGAGGAGGAGGCGGCGAAACAAGTAATCCACCGCCGGAGAATGTCGAACCCCAGATTGGTAGTAGCTTCGTCGATATGAGGCAACTCTTGGTTTGGCCGATTGCACCAGTGCCTTTCTTCTGTAGTTGCTGCCATGTTATGAGAGTAATGGTTCATACTAATGGCGTACGTTTCAGAAAACTCGAGATTCATGGAAAAGTCGGTTTGATCAGTCATGCAATTTTCGAAGATCGGCCCACCCTCGCTCCAAATTCTTCCAATTCTCAGTATCAAATGTTTGATTTTTGCAACAACAATATGGACGAAATCAAGCTGTTTTTACTACAATACAACGTCAACAATGTTCTTGCTGATTACTATCCTGTTCCAGAACCTATGTCGTTCTTCTACGACACCCTTTGCGTTGGAATGGGGCGGGATGATAACGCTAATCCTAAAAATGAACGACAACCCCCGCAGTCAAACCAACCTCCAGCCCCTCACCCACCACAGCCTCCTCCTCCCCCACCCCCCCCCCCTCCCCAGCTGCCCCCTGTCCCTCCACCCCCTGGAAATTCAGGTCCGCCAGGAGGAGCCCTAGGAGAAAGACAGGGCGGTCGTAACAGAACCAGAAATCGGACAAGAACATCGTTGGCGGCGCAGCTAGTGCAGCGGCAGAGAACAGGGAAGATGACAGTTAGCGATCTGCACGAGTATCTCCATCTTCCTGTTCGTGAGGATTCTAGGAAAACGGAGGTCTTTAGGGTGGAAGACATGGAAAACGGTGCTTCGCATAAAACGCTTACGGTTGAGGAGGTCTTTGGGGATCTTAAAGGTCGCAGGGTTGGCCTGATTAAAGCTCTTACTACTGGTATGTCTTTCTTTTTAATTCAAGTCCTCTCTTTTTCCTTCATTTGCGAGTACGGACTGAAGTTTGTCTCTCGTCGCGCAGATTTTGAAAGATTTTATAGCCAGTGTGATCCCGATAAGGAAAACGTCTGCCTTTATGGATATCCCGATGGGAATTGGGCTGTCAGTTTACCTGCCGAAGAAGTGCCTTCTGAGCTTCCAGAACCTGCACTGGGAATTAATTTTCCCAGAGATGGGATGCGTGCGAAGGATTGGTCATCCTTGGTTGCTGTCCACAGTGATTCATGGTTACTTTCTGTAGCCTTTTACTACGGTGCTAGGTTTGGCTTTCGTCAAACTGATAGGATGCGTCTTTTTGATATGATAAACAATCTTCCAACAATATTTGAGGTTCTTAAGGAGTTAGCGGAGAAACAAAAGAAGGCAGAGGCATCAGTTTCAAAACCCAGCCTCAAAAAGTTTACATCCAATTCAAAGCAATGTACTGATTCTGAGGAAGAACTTTCAATGCCAATGCAAGTCGTGGATGAGAAAGATGGTGATGGACAGGAAGAAACTTTATGTGGAGCCTGTGATGAGAACAATGGAACTGATGAATTCTGGATCTGCTGTGACGTGTGTGAGAAGTGGTTCCATGGCAAATGTGTCAAGATCACCGCAGCAAGAGCAGAGCATATCAAGCATTACAAATGCCCGTCTTGCAGTAACAAGAGAGCCCGACAATAA | 1857 | 47.87 | MADPGEIFPYDDPSYYGLSTDYVLNMMTDQNPTFANLANLAGPSSSSVPTLEAEGELGDSDILFDQSGWEWLNYQPISGGSSAAGPSKVDGEGCGGGGGETSNPPPENVEPQIGSSFVDMRQLLVWPIAPVPFFCSCCHVMRVMVHTNGVRFRKLEIHGKVGLISHAIFEDRPTLAPNSSNSQYQMFDFCNNNMDEIKLFLLQYNVNNVLADYYPVPEPMSFFYDTLCVGMGRDDNANPKNERQPPQSNQPPAPHPPQPPPPPPPPPPQLPPVPPPPGNSGPPGGALGERQGGRNRTRNRTRTSLAAQLVQRQRTGKMTVSDLHEYLHLPVREDSRKTEVFRVEDMENGASHKTLTVEEVFGDLKGRRVGLIKALTTGMSFFLIQVLSFSFICEYGLKFVSRRADFERFYSQCDPDKENVCLYGYPDGNWAVSLPAEEVPSELPEPALGINFPRDGMRAKDWSSLVAVHSDSWLLSVAFYYGARFGFRQTDRMRLFDMINNLPTIFEVLKELAEKQKKAEASVSKPSLKKFTSNSKQCTDSEEELSMPMQVVDEKDGDGQEETLCGACDENNGTDEFWICCDVCEKWFHGKCVKITAARAEHIKHYKCPSCSNKRARQ | 618 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 53610034 | 53622421 | + | BLOR01452 | Blo01g01452 | 55892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g01452 | 618 | ProSiteProfiles | Zinc finger PHD-type profile. | 562 | 614 | IPR019787 | - | |
Blo01g01452 | 618 | Pfam | Alfin | 404 | 510 | IPR021998 | GO:0006355|GO:0042393 | |
Blo01g01452 | 618 | MobiDBLite | consensus disorder prediction | 234 | 304 | - | - | |
Blo01g01452 | 618 | MobiDBLite | consensus disorder prediction | 245 | 282 | - | - | |
Blo01g01452 | 618 | Pfam | PHD-finger | 565 | 614 | IPR019787 | - | |
Blo01g01452 | 618 | SMART | PHD_3 | 564 | 612 | IPR001965 | - | |
Blo01g01452 | 618 | PANTHER | CPG BINDING PROTEIN | 404 | 617 | IPR045104 | GO:0006355|GO:0042393 | |
Blo01g01452 | 618 | PANTHER | CPG BINDING PROTEIN | 353 | 386 | IPR045104 | GO:0006355|GO:0042393 | |
Blo01g01452 | 618 | CDD | PHD_AL_plant | 564 | 614 | IPR044104 | - | |
Blo01g01452 | 618 | SUPERFAMILY | FYVE/PHD zinc finger | 555 | 615 | IPR011011 | - | |
Blo01g01452 | 618 | PANTHER | ALFIN-LIKE TRANSCRIPTION FACTOR | 404 | 617 | - | - | |
Blo01g01452 | 618 | PANTHER | ALFIN-LIKE TRANSCRIPTION FACTOR | 353 | 386 | - | - | |
Blo01g01452 | 618 | MobiDBLite | consensus disorder prediction | 81 | 112 | - | - | |
Blo01g01452 | 618 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 555 | 613 | IPR013083 | - | |
Blo01g01452 | 618 | ProSitePatterns | Zinc finger PHD-type signature. | 565 | 611 | IPR019786 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g01452 | Blo17g00276 | CCT | |
Blo01g01452 | Blo17g00276 | ECH | |
Blo01g01452 | Blo12g01023 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01452 | Blo-Chr1:53610034 | Blo03g00275 | Blo-Chr3:5650017 | 6.98E-80 | dispersed | |
Blo12g01024 | Blo-Chr12:28152758 | Blo01g01452 | Blo-Chr1:53610034 | 1.56E-57 | dispersed | |
Blo14g00563 | Blo-Chr14:8484159 | Blo01g01452 | Blo-Chr1:53610034 | 8.85E-45 | dispersed | |
Blo16g00234 | Blo-Chr16:5245768 | Blo01g01452 | Blo-Chr1:53610034 | 5.02E-68 | dispersed | |
Blo01g01452 | Blo-Chr1:53610034 | Blo12g01023 | Blo-Chr12:28150001 | 2.55E-84 | wgd | |
Blo01g01452 | Blo-Chr1:53610034 | Blo17g00276 | Blo-Chr17:2903439 | 1.81E-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11920 | PF12165 | Alfin | 2.00E-51 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g01452 | - | - | rcu:8258558 | 337.421 |