Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01457 ATGGAAGAGGAAGTGGAGAGGGATGTGAAGATGGAATCGGAAATGGATGATCCGGTAGATGAGAATGGAGGGGAGGAGGTGCTCGGGTCTAGTTTGACGATGGAGAAGGTCGCGGCAGCCAAGAAATTCATAGAGAATCACTACAGAGCTCAGATGAAGAACATTCGAGAGCGGAAAGAGAGGCGATGGGTGTTAGAGAGTAAATTGGCTTCCTCAGCTGTGCCTAAGGAGGAGCAAATGAACCTTATCAAAGATTTAGAGCGAAAAGAAACAGAGTTTATTCGACTTAAAAGGCACAAGATTTGTGTGGACGATTTTGAGCTCTTAACCATAATTGGCAGAGGAGCATATGGCGAAGTGCGATTGTGTCGGGAGAAAAAATCTGGCAATATATATGCCATGAAAAAATTGAAAAAATCTGAAATGCTCATGAGAGGACAGGTGGAACATGTAAGAGCAGAAAGAAATTTGCTAGCAGAAGTTGCCAGCCATTGCATAGTTAAACTTTACTACTCATTTCAAGATGCTGATTTTTTATACTTAATCATGGAATATCTACCAGGTGGTGACATGATGACTCTTCTGATGAGGGAAGATATATTAACTGAAATTGTTGCTAAATTTTACATTGCTCAAAGTGTTCTAGCGATAGAATCTATTCACAGTCACAACTACATTCACAGAGATATAAAACCTGACAACCTTCTTCTGGACAAAAATGGACACATGAAGCTCTCAGATTTTGGCCTTTGTAAGCCCCTTTATTCTACAACGTTGTCTGCTCTGCATGAAAATGGAACAATGGATGATGAAACTTTGGCGGAGCCAATGGATGTGGATGATTGTGTTTCTGCTGACAACCAGAATAGTTGGAAGAGCCCACGTGAACAACTTCATCGTTGGCAGATGAACAGAAGGAAGCTGGCATTTTCAACCGTGGGAACCCCTGATTATATTGCTCCTGAAGTACTATTGAAGAAAGGATATGGAATGGAGTGTGACTGGTGGTCTCTAGGTGCAATAATGTATGAAATGCTGGTTGGTTATCCACCATTTTATGCGGATGATCCAATCACCACTTGTAGAAAGATTGTTCATTGGAAAACCCAGCTAAAGTTTCCAGATGACACAAAGTTGACACCTGAGGCAAAGGATCTCATTTGTCAGTTGCTATGTGATGTTGATCATAGACTAGGTGTTGGAGGGGCACACCAAATAAAAGCCCATCCTTGGTTCAAAGATGTTTTGTGGGATAAACTTTATGAAATGGATGCTGCCTTCAAACCAGAAGTAAACGGAGAGCTTGATACCCAGAATTTCATGAAGTTTGATGAATTGGATCCTCCAACCCAAGCAAGATCTGGTTCGGGACCATCTAGAAAGCTGCTCTTGACGCCCAAAGATCTCAGCTTCGTGGGGTATACATACAAGAACTTTGATGCTGTTCGGGGAAATCGCCAGTCATATGATGAAACTGAAGCAGATTATTCATCCGAGCTGCTAGCCAATAGATCTGAAACAATTCAAATTTCAGAAAAAGCTTTGCCTGGGCTGGTACTAGTAGAACAAGAAATTCTCTGGGGAACATTGGATATATTTGTGTGA 1605 41.62 MEEEVERDVKMESEMDDPVDENGGEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIRERKERRWVLESKLASSAVPKEEQMNLIKDLERKETEFIRLKRHKICVDDFELLTIIGRGAYGEVRLCREKKSGNIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADFLYLIMEYLPGGDMMTLLMREDILTEIVAKFYIAQSVLAIESIHSHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLYSTTLSALHENGTMDDETLAEPMDVDDCVSADNQNSWKSPREQLHRWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWKTQLKFPDDTKLTPEAKDLICQLLCDVDHRLGVGGAHQIKAHPWFKDVLWDKLYEMDAAFKPEVNGELDTQNFMKFDELDPPTQARSGSGPSRKLLLTPKDLSFVGYTYKNFDAVRGNRQSYDETEADYSSELLANRSETIQISEKALPGLVLVEQEILWGTLDIFV 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53680900 53686148 - BLOR01457 Blo01g01457 55897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01457 534 SMART serkin_6 106 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01457 534 Gene3D Transferase(Phosphotransferase) domain 1 311 430 - -
Blo01g01457 534 Gene3D Transferase(Phosphotransferase) domain 1 190 258 - -
Blo01g01457 534 CDD STKc_NDR_like 104 477 - -
Blo01g01457 534 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 493 - -
Blo01g01457 534 SUPERFAMILY Protein kinase-like (PK-like) 90 457 IPR011009 -
Blo01g01457 534 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo01g01457 534 Pfam Protein kinase domain 303 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01457 534 Pfam Protein kinase domain 107 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01457 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Blo01g01457 534 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Blo01g01457 534 MobiDBLite consensus disorder prediction 1 26 - -
Blo01g01457 534 ProSiteProfiles Protein kinase domain profile. 106 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01457 534 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 26 493 - -
Blo01g01457 534 Gene3D Phosphorylase Kinase; domain 1 431 441 - -
Blo01g01457 534 Gene3D Phosphorylase Kinase; domain 1 104 189 - -
Blo01g01457 534 SMART pkinase_C_6 413 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01457 Blo-Chr1:53680900 Blo08g00352 Blo-Chr8:5513656 0 dispersed
Blo01g01457 Blo-Chr1:53680900 Blo06g00514 Blo-Chr6:27285544 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84114 PF00069 Pkinase 1.30E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01457 K08790 - zju:107420106 857.44