Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01462 ATGAGCAAAGACGATGATGATCCACGAAAGGGCGAATTAGCATCAAGGCTCGGATCATCTGGGTCGCACTCCCCACGATGGTTGACGAACTTTCACCGTGATTTGATGGCTGGAGCGGTGATGGGCGGAGTTGTACACACGATTGTTGCCCCAATTGAGAGGTCGAAGCTTCTTTTACAGACTCAAGAGAGCAATTTGGCCATTGTTGGAGTTGGGCGAAAAAAATTTAAAGGTCTGTTTGATTGTATTGCAAGAACAGTAAGGGAAGAAGGCATTCTTTCTCTCTGGAGAGGCAATGGTAGTAGCGTTCTGCGTTATTATCCGTCAGTCGCTCTCAATTTTTCGCTCAAGGATCTTTATAGGACTATGTTAAGAGGTGGGAACTCCAGTGAAAATGGTGGTAATTTTTGGTCTGGTCCCTCAGCTAACTTTGTGGCTGGCGCTGCTGCTGGTTGCACCACACTGATTCTAATATATCCTCTCGACATTGCACACACCCGACTCGCTGCTGACATCGGAAAAACCGGTGACCGTCAGTTTCGAGGCATCTACCATTTCCTTACGACAATACACAAAAAGTATGGAATTAAAGGAATTTACAGGGGCCTTCCTGCGTCTCTACAAGGGATGGTCATCCACCGAGGCCTCTACTTCGGAGGTTTCGATACCACAAAAGAGATCCTGTCGGAAAATTACAATACTGACTTGGCTCTGTGGAAGCGTTGGATTGTAGCTCAGGGAGTTACGACTTCTGCCGGTTTGTTATCCTACCCTCTGGACACCGTTCGGAGGCGAATCATGATGCAGTCTGGTTGGGAAGGGTCTATGTACTGTTCTACACTGGACTGCTGGAGGAAGATATATCGGACAGAAGGGGTGGCTTCATTTTATCGTGGGGCCGTCTCAAACGTATTTAGGAGCACGGGGGCGGCCGCAATTCTGGTTTTGTACGACGAGATAAAGAAGTTTATGAGATGGGGTGGATTTTGA 990 47.68 MSKDDDDPRKGELASRLGSSGSHSPRWLTNFHRDLMAGAVMGGVVHTIVAPIERSKLLLQTQESNLAIVGVGRKKFKGLFDCIARTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRTMLRGGNSSENGGNFWSGPSANFVAGAAAGCTTLILIYPLDIAHTRLAADIGKTGDRQFRGIYHFLTTIHKKYGIKGIYRGLPASLQGMVIHRGLYFGGFDTTKEILSENYNTDLALWKRWIVAQGVTTSAGLLSYPLDTVRRRIMMQSGWEGSMYCSTLDCWRKIYRTEGVASFYRGAVSNVFRSTGAAAILVLYDEIKKFMRWGGF 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53797698 53799827 - BLOR01462 Blo01g01462 55902

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01462 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 323 IPR018108 -
Blo01g01462 329 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 26 328 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo01g01462 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 123 IPR018108 -
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 153 171 IPR002067 GO:0055085
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Blo01g01462 329 PRINTS Mitochondrial carrier protein signature 98 118 IPR002067 GO:0055085
Blo01g01462 329 SUPERFAMILY Mitochondrial carrier 30 319 IPR023395 -
Blo01g01462 329 Pfam Mitochondrial carrier protein 237 324 IPR018108 -
Blo01g01462 329 Pfam Mitochondrial carrier protein 137 231 IPR018108 -
Blo01g01462 329 Pfam Mitochondrial carrier protein 30 125 IPR018108 -
Blo01g01462 329 MobiDBLite consensus disorder prediction 1 22 - -
Blo01g01462 329 PRINTS Adenine nucleotide translocator signature 31 43 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo01g01462 329 PRINTS Adenine nucleotide translocator signature 109 121 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo01g01462 329 PRINTS Adenine nucleotide translocator signature 76 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo01g01462 329 PRINTS Adenine nucleotide translocator signature 241 257 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo01g01462 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 227 IPR018108 -
Blo01g01462 329 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 26 328 - -
Blo01g01462 329 Gene3D Mitochondrial carrier domain 33 326 IPR023395 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01462 K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 - zju:107420065 525.398
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01462 Blo-Chr1:53797698 Blo05g00204 Blo-Chr5:2078225 2.13E-63 dispersed
Blo01g01462 Blo-Chr1:53797698 Blo17g00284 Blo-Chr17:3011091 4.12E-29 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g90 Blo01g01462 . . . . . Bma04g00124 . . Cmo12g00580 . . . . . Cpe07g00561 . . . . . . . . . . . . . . . . . . Cone20ag0273 . . . . . . . . . . . . . . . . Cma12g00641 . Car05g00075 Cpe11g00070 . . . . . . . . . . . . . . . Lsi08g01591 . Chy03g01656 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007060 2 1 1 2 2 1 2 1 0 1 1 1 2 1 1 2 1 2 2 1 1 1 0 1 1 1 1 2 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01462 Blo_Chr01 FPKM 6.143706 6.941193 8.239702 7.876174 5.414233 6.710981 5.082548 13.172401 12.861167 12.509637