Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01463 ATGAGAAGTTCGATTATGGCGAATGAGAGCTTGTCCGTATTGTCTTCTGCATCTGGCGAGGTTTTAAGTGCGTCTTCCGGTTCGAGAATTGAAGAGACTGTAGCCACCACCCTCCACTCTCATCACTCATACGGTTCAACAAATCAACCACCTTTATCGTCAAAGAAGAAGAGAAGTCTTCCAGGCAATCCAGACCCAGAAGCTGAAGTGATGGCTTTATCTCCCAAAACTCTACTGGCAACGAATAGATTCATGTGTGAGATTTGTAACAAAGGGTTTCAGAGAGATCAGAATCTGCAGCTACACAGAAGAGGACATAATTTGCCATGGAAACTGAAGCGAAGAACAAGCGTGGAAGTGAAGAAGAAGGTGTACGTATGTCCAGAAATTACATGTGTGCATCATGACCCTTCACGGGCTCTCGGAGACCTCACTGGAATTAAAAAGCATTTCTTCAGAAAACATGGCGAGAAGAAATGGAAGTGTGAAAAATGCTCTAAACGGTACGCTGTTCAGTCAGATTGGAAAGCTCACTCTAAGATTTGTGGAACAAGAGAGTATAGATGTGATTGTGGGGCCATCTTCTCAAGGAGGGACAGTTTCATCACGCACAGAGCTTTCTGCGATGCTTTAACTCAAGAGAGTTTTAAAGCAATGGCAGCAGTAAACCCACTTCTTTCAGCTTCTCAATCTCAGCTCCATAGCTATGGCTGCTTCCCACAAGTACCAGTGAAAAATGAACCAGACCTTAAATCAGGTCCTCAAGTTCCTCCTTGGCTGACGAACCAATCTGCGTTAATAGGATCTGAACCGGTTTCATGCCTCCAGACTATGGATCATCCAACCGCACTATTGTTTTCGTCTTCCTTAGAACGGTCTCTTCTTCACCACCGAAACCCAAACCCTAACCCTAATTCTACATCTTCCTCCACCATGTCTGCAACTGCGTTGCTGGAGAAAGCCACGCTAATTGGCTCAACTGCGGGCAGCTCTTCTCCGCTGTTTGTACCTCACGAAGCTCATATAACTCGGAATAATGGAGCTGCGATCAGTTCAGCTCCAACAACGTCATCAATGGCGTCGTCTTCGCGTGAAGAAATGGCGGAAGATCAGCTTGGTATTGGTTCTGCAATTTTTGGGAACAAAACTGCTTCTTTTATTTCATCTGGGGCGGGAGGTGGAGCTCCTTCTCTTCTTCACGATATGATGCTTTCCATTTCTGGGTTTGACGAGCCGTCTTTAGAAGAGACGCTGAGTGGAATGTTTTCTCAGAGGAAAGACGAAGACGGTATGGAGGATATACCATCGAATCCAAACGCAGAGGTCTACTTCGGGAGAAGCAATGGAGGTGCTGGTGGAAGAGGAGGTACTGCCAGGGACGGCTTTGGCGGTGGAGAGACGAGGGACTTCTTGGGTCTGAGACCATTCTCACACAGAGACTTCATCAATTTAACTATGCTCAATGACGTTGATTCTTCGTCGGCTTTCTCTCAGCATAATCAGAACCAGATCACTTGGGTATTGAGAAGGGCAAATCTAAGTGCTAACTCACTAAGAACTCCAGGAAACGATATGATAATGCCAGGAGCAGTGGAGGACGCATTTCCCATGGAGTCTGCAGAGTATCCAGATGAATTGCGACTCGAGTAG 1650 46.24 MRSSIMANESLSVLSSASGEVLSASSGSRIEETVATTLHSHHSYGSTNQPPLSSKKKRSLPGNPDPEAEVMALSPKTLLATNRFMCEICNKGFQRDQNLQLHRRGHNLPWKLKRRTSVEVKKKVYVCPEITCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGAIFSRRDSFITHRAFCDALTQESFKAMAAVNPLLSASQSQLHSYGCFPQVPVKNEPDLKSGPQVPPWLTNQSALIGSEPVSCLQTMDHPTALLFSSSLERSLLHHRNPNPNPNSTSSSTMSATALLEKATLIGSTAGSSSPLFVPHEAHITRNNGAAISSAPTTSSMASSSREEMAEDQLGIGSAIFGNKTASFISSGAGGGAPSLLHDMMLSISGFDEPSLEETLSGMFSQRKDEDGMEDIPSNPNAEVYFGRSNGGAGGRGGTARDGFGGGETRDFLGLRPFSHRDFINLTMLNDVDSSSAFSQHNQNQITWVLRRANLSANSLRTPGNDMIMPGAVEDAFPMESAEYPDELRLE 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53803380 53816561 + BLOR01463 Blo01g01463 55903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01463 549 MobiDBLite consensus disorder prediction 38 69 - -
Blo01g01463 549 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 106 IPR013087 -
Blo01g01463 549 SUPERFAMILY beta-beta-alpha zinc fingers 83 180 IPR036236 -
Blo01g01463 549 MobiDBLite consensus disorder prediction 38 56 - -
Blo01g01463 549 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 14 484 - -
Blo01g01463 549 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Blo01g01463 549 Pfam Zinc-finger double-stranded RNA-binding 84 106 IPR022755 -
Blo01g01463 549 Gene3D Classic Zinc Finger 138 218 - -
Blo01g01463 549 Gene3D Classic Zinc Finger 62 131 - -
Blo01g01463 549 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 484 - -
Blo01g01463 549 SMART c2h2final6 160 180 IPR013087 -
Blo01g01463 549 SMART c2h2final6 84 106 IPR013087 -
Blo01g01463 549 SMART c2h2final6 125 155 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01463 Blo-Chr1:53803380 Blo05g00053 Blo-Chr5:512809 5.99E-124 dispersed
Blo01g01463 Blo-Chr1:53803380 Blo10g00983 Blo-Chr10:29046214 1.43E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11921 PF12171 zf-C2H2_jaz 6.90E-05 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01463 K25870 - vvi:100257789 476.478