Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01470 ATGTCAAGAGCGCCTTCTCTTTCCGAGCTTAGCCTTCTCATCCTTTGTTCTGCGCTCTTCGTTTCCACTCTCTCCTTTGAATTTGATGAGTTATTTCTCTCCAATTCCACTTTGGACGCCAACAATGCATCTCTCTCCAGGAACAAAGAAGGCAGCTTCGCCGATATCATTGATCGTGCTCTCCAGAATGAATTCAAAGAGAATGACCAGAATGAAGCTCCTGATGCAGGAAGTTTCAATAACAGTGTCACGGAACAGCAGGCAGTTCTAGAAACTGTAGCCAGGGTGAAGCCAAAGAAAAATGACACAAAAGAGGAAAAGCCATTTCAACTTCATCACGTTTTCAATCTGGATAATGATAATAGAGCAGAAGATACCCCAACATTGATAGATCGAAGAGACAATGTATTTATTATATCAAACTTCAAATCCAAATATCCAGTGCTCCAGCTGGACTTACGATTAATCTCAGATCTGGTAGTTGTTATTGTGTCTGCAACTTGTGGCGGCATTGCTTTTGCTTGTGCAGGACAACCAGTTATTACTGGATATCTACTGGCTGGATCTGTTATTGGACCTGGCGGATTTAACTTCATCAGTGAAATGGTGCAAGTAGAAACTGTGGCCCAGTTTGGTGTAATTTTTCTTCTTTTTGCATTGGGCCTTGAGTTCTCTACAGCGAAGCTTCGAGTTGTTAGAGCTGTTGCTGTTTTAGGAGGACTCCTTCAAATCGCCCTATTTATGTGCCTCTGTGGAATCACTGCTGTGTTATGTGGCGGAAAGGGTTCAGATGGAGTATTTGTCGGCGCATTCCTTTCCATGTCTTCAACAGCAGTGGTGTTGAAGTTTTTGATGGAGAAGAATGCAACTAATGCTCTTCATGGCCAAGTCACCATTGGCACGCTTATCCTGCAGGATTGTGCTGTGGGCTTGCTGTTTGCTTTGCTTCCAGTTCTCGGCGGAACTTCTGGTGTTCTCCAAGGAGTTTTATCCATGTCTAAAGTGTTGGTGGTGTTGATTGCGTTTTTGGCTGTTTTAACATTGTTGTCTCGTACTTGTGTTCCTTGGTTACTTAAATTGATGATAAGTCTATCATCCGAGACAAATGAACTCTATCAATTAGCATCAGTTGCATTCTGCTTGCTTGTAGCTTGGTCAAAGGCATCACAATTGGATCTTATTTTTTTTGTGTTTCTCTGCATCAAGATTGTAGGTAATGATCCTGAAGAAGTAAAATGTGAAGCCCTAGAAGTTCCTAGGTGGTTGTGTAGCGATAAGCTGGGATTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATCTCAACAACTGATCTTGCTCAACATACATTAGAACAAGTTGAACCTATCCGGAACTTCTTTGCTGCCCTTTTCCTTGCCAGCATTGGGATGCTGATCCATGTTCATTTTCTCTGGAACCATGTTGATATATTACTAGCATCTGTTATTTTGGTCATCATTGTGAAATCTGTAATAATTAGCTCTGTGGTGAAGGCATTTGGTTACAACCACAAGGCATCACTTCTTGTCGGGTTATCTTTGGCTCAAATTGGAGAATTTGCCTTTGTACTTCTCAGTCGAGCTTCTAATCTCCATCTAGTTGAGGGGAAATTATACTTGCTACTTATTGGGACTACCACTCTAAGCCTGCAGCATAAATCAACTTACAGTGCATATATTCTGCAGGTATCAACTCCTTTGTTATTCAAGCTGATTCCTGCTGTAGTGCATATAGGTGTTCTCTTACGGTGGTTCTCACATGATAGCTCTGTAGAGATTGGATTTAAAGGAGATAACCTCCGCACAGAGGGTGGCAAGCAGCGCGTCATGATCAAGAAATCAGAATTGACCTTGAACATGGAAGCACAGCCAGGAACCAGACTGCTGCAAAAATATAACAAAGCCGGCATTACATTTTCTCTGTGA 1950 42.1 MSRAPSLSELSLLILCSALFVSTLSFEFDELFLSNSTLDANNASLSRNKEGSFADIIDRALQNEFKENDQNEAPDAGSFNNSVTEQQAVLETVARVKPKKNDTKEEKPFQLHHVFNLDNDNRAEDTPTLIDRRDNVFIISNFKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSVIGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQIALFMCLCGITAVLCGGKGSDGVFVGAFLSMSSTAVVLKFLMEKNATNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVLSMSKVLVVLIAFLAVLTLLSRTCVPWLLKLMISLSSETNELYQLASVAFCLLVAWSKASQLDLIFFVFLCIKIVGNDPEEVKCEALEVPRWLCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLASVILVIIVKSVIISSVVKAFGYNHKASLLVGLSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTTLSLQHKSTYSAYILQVSTPLLFKLIPAVVHIGVLLRWFSHDSSVEIGFKGDNLRTEGGKQRVMIKKSELTLNMEAQPGTRLLQKYNKAGITFSL 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53950899 53956840 + BLOR01470 Blo01g01470 55910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01470 649 Pfam Sodium/hydrogen exchanger family 160 386 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo01g01470 649 Pfam Sodium/hydrogen exchanger family 422 558 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo01g01470 649 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 31 387 IPR045158 GO:0015386|GO:0071805|GO:1902600
Blo01g01470 649 PANTHER K(+) EFFLUX ANTIPORTER 6 31 387 - -
Blo01g01470 649 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 422 620 IPR045158 GO:0015386|GO:0071805|GO:1902600
Blo01g01470 649 PANTHER K(+) EFFLUX ANTIPORTER 6 422 620 - -
Blo01g01470 649 Gene3D - 420 570 IPR038770 -
Blo01g01470 649 Gene3D - 153 416 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01470 Blo-Chr1:53950899 Blo18g00286 Blo-Chr18:3002232 0 dispersed
Blo01g00894 Blo-Chr1:17964690 Blo01g01470 Blo-Chr1:53950899 1.32E-27 transposed
Blo08g00337 Blo-Chr8:5117255 Blo01g01470 Blo-Chr1:53950899 4.96E-67 transposed
Blo15g00147 Blo-Chr15:1409079 Blo01g01470 Blo-Chr1:53950899 0 transposed
Blo01g01470 Blo-Chr1:53950899 Blo17g00290 Blo-Chr17:3059252 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01470 - - jre:109008862 852.432