Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01477 CAGAGTGAAGATGGAGATATTGTTGACTGCGTTGACATTCACAAACAGCCTGCGTTTGACCATCCTGCTCTCAAGAACCACAAAATCCAGGTGCAACCCAGTTTCCAGTTTCCGTCGGTGGAGACGACGTCCGACTCGAAGGAACCAGAACCCGCTTCTCGACTGACAAGGGTGTCCCAAACATGGCAGAAAAGTGGAAACTGTCCGACAGGAAGCATTCCGATACGTAGAATTAAAAAGGAAGACCTGTTAAGAGCTTCAAAACTTGATTTATATTCCCGGCTAATTCCTTTCTATGTTTTATATCAGAATGAGCTGATTGATGCTTTTGAATATTGTTCATCAAAACAGACAGCAATTCTCTTCACATTAGGGTACAACTACATAGGAGCCGTAGGAGACCTTAATGTTTGGAACCCATCACTTGGATCAGACAACGATTTCTCAGGAGTTCAAGTCTGGCTTAAAAATGGACCAAGTGAAGGATTTGAAAGTGTAGAAGCAGGCTGGGTGGTAAACCCATCGTTGTACGGAGATAGACTTACTCGGCTATCCATTTATTGGACAGTGGACTCCTACAAATCAACAGGGTGTTTTGACCTAACTTGCAGTGGGTTTATCCAAACAGACCCTCATATCGCCCTTGGTACAGCTTTAGACGGTATCTCTGGCGAAGGGGGAGACCAGTATGTTTTGCCAGTGGCCCTGACCTTGGATGCCTACTCGGGCAATTGGTGGTTGATATTCGGAAACGACACACTCGTGGGATATTGGCCAGGATCTCTATTTGGATATATAAATCATAGTGCAACTCTGGTGGAATGGGGAGGAGAAGTTTTCAGTTCAAATCTAAGGACGACTCCTCACACGACGACTGCGATGGGGAGCGGAAATTTTGCGTCCTATCTCTTCGGGAGTGCATGTTTCGTTATGCGACCAAGAATCATGGATTACTCTCTCACTCTGAAGTATCCAAGGAATGTTTTCACCTACGCAGACGAGCCTTACTGTTACAATGGCTTGAATTACCAGGTAGGTTATACTACTGAACCTGTCTTCTTCTTTGGAGGACCTGGTCAAAGCCATCTCTGTCCTTAA 1098 45.26 QSEDGDIVDCVDIHKQPAFDHPALKNHKIQVQPSFQFPSVETTSDSKEPEPASRLTRVSQTWQKSGNCPTGSIPIRRIKKEDLLRASKLDLYSRLIPFYVLYQNELIDAFEYCSSKQTAILFTLGYNYIGAVGDLNVWNPSLGSDNDFSGVQVWLKNGPSEGFESVEAGWVVNPSLYGDRLTRLSIYWTVDSYKSTGCFDLTCSGFIQTDPHIALGTALDGISGEGGDQYVLPVALTLDAYSGNWWLIFGNDTLVGYWPGSLFGYINHSATLVEWGGEVFSSNLRTTPHTTTAMGSGNFASYLFGSACFVMRPRIMDYSLTLKYPRNVFTYADEPYCYNGLNYQVGYTTEPVFFFGGPGQSHLCP 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54060753 54062302 + BLOR01477 Blo01g01477 55917

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01477 365 Gene3D - 142 255 - -
Blo01g01477 365 Pfam Neprosin 146 358 IPR004314 -
Blo01g01477 365 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 1 362 - -
Blo01g01477 365 MobiDBLite consensus disorder prediction 37 68 - -
Blo01g01477 365 MobiDBLite consensus disorder prediction 53 68 - -
Blo01g01477 365 Pfam Neprosin activation peptide 1 94 IPR025521 -
Blo01g01477 365 PANTHER ASLB (DUF239)-RELATED 1 362 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01477 - - - mnt:21402478 442.58
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01477 Blo-Chr1:54060753 Blo14g00326 Blo-Chr14:3357621 1.28E-93 dispersed
Blo19g00340 Blo-Chr19:22336680 Blo01g01477 Blo-Chr1:54060753 1.00E-38 dispersed
Blo01g01477 Blo-Chr1:54060753 Blo12g00295 Blo-Chr12:17412390 3.22E-51 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g49 Blo01g01477 . . . . Bpe02g00477 . . Cmo05g00114 . . Cma05g00108 . . Sed08g1753 . . Bhi04g00486 Tan02g1660 Cmetu03g1286 . Hepe08g1375 . Lcy13g2171 Cla05g01813 Cam05g1937 Cec05g1950 Cco05g2011 Clacu05g1929 Cmu05g1811 Cre05g1937 Cone4ag1646 . Cone17ag0913 . Lsi04g01441 . . . . . . . . . . . . Cmo01g01758 . . . Car01g01365 Car05g00093 Cpe11g00088 Cpe02g00291 Bhi09g03178 . . . Hepe01g1862 Mch11g0397 . . . . . . . . Lsi08g01567 Csa02g01854 Chy03g01630 Cme07g00244
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003410 0 1 1 1 1 2 3 2 2 2 1 2 3 1 2 6 2 1 3 2 2 2 1 0 0 2 1 0 0 1 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01477 Blo_Chr01 FPKM 2.750958 4.437761 20.396885 22.59128 11.220117 13.091286 11.467019 13.457042 13.681318 13.917268