Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g01485 | ATGGAAGATTTGGAAGGGCATGATGTGCAATTTCAGCGTAGAAGAGAAGGCATTATGCATTGTTCATCTTCTGAGATGAACACGAACCCAAATCCAATGCCTGAAAAGATTTCAGGAATGTCAATTGGGACAGTTTCTCTGTACAGATCTTCAATGGGAAGCTCTGGGGAGCCTTTCTTCTCTTCTGGTTGGGATTCGTTTGCTAACTTGGGTCAGAGGGAAAATTTTGGATCCTTTATTTCTCATGATGAATTATCCAGTTCTTACCAGCATAACATGTTGGAAAATCCTCACTCGTTTGATTCGACTTATGTCGAGATGGTTCCGAAATTTCCGAGCTTTTCAAGTGGCAATTTCTCAGAAATGGGTAGTTCATTTGTTCTATCTCAACGTCTCCAGATTGTTAATGATGATTGTCCTTCAAATCTTCAAGAAAACAGAGCAGCCGGAGTATCCCCAAATGACAAGAGCAGAAAGCAAGGGCCTGATACCGCTTCATTCAGATCATATGAGAAAGTTGACATGGATTTGGGTAAGGATTCAAATGGAGAAAGTTCTGATGGTTTAAGAGAACAACATCAGAAAAAACCAAAGATTGAAGACAACAATGGCAGGAATTTGCTTAACAAGCCGACCGTAAAACAGGCCAAAGACAACTCTCCCAAGGCAGAAACCTCCAAGGAAAACTACATTCACGTGAGAGCCCGCAGAGGGGAGGCTACAAATAGTCACAGCCTCGCCGAAAGGATAAGGAGAGAAAAGATTAGCGAGCGGATGAAATTGCTTCAAGAACTCGTCCCGGGATGCAACAAGATTACAGGCAAGGCGGTAATGTTGGACGAAATTATCAATTACGTTCAATCACTGCAGCAGCAGGTTGAGTTTCTGTCGATGAAACTTGCCACTGTAAATCCGGAGATTTATACCAATATGGAGGGCATTCTATGGAAAGATATGCTGCACTCTCAGGGCTCCAATGGAGAAATTCTTGGGGTTGGCTCTTCTCAACCGTTCTTCCCTCGAAGAATGTTACCGCCCCAAACTGCCTTTTCTCAGTTTCTTCCTTCGGCTCGAGTGAGTTTAGGACCCTCGAATGAAGCCATGGCCACCTTTCCTTGGCCAGCAACACTAACTGAAGATAAGGTTCAGACAGTTGTCCAAAATGAGTCCCAGATTCATTTTCAAATGGGATTGGATTCGGGTTGA | 1206 | 43.53 | MEDLEGHDVQFQRRREGIMHCSSSEMNTNPNPMPEKISGMSIGTVSLYRSSMGSSGEPFFSSGWDSFANLGQRENFGSFISHDELSSSYQHNMLENPHSFDSTYVEMVPKFPSFSSGNFSEMGSSFVLSQRLQIVNDDCPSNLQENRAAGVSPNDKSRKQGPDTASFRSYEKVDMDLGKDSNGESSDGLREQHQKKPKIEDNNGRNLLNKPTVKQAKDNSPKAETSKENYIHVRARRGEATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEIYTNMEGILWKDMLHSQGSNGEILGVGSSQPFFPRRMLPPQTAFSQFLPSARVSLGPSNEAMATFPWPATLTEDKVQTVVQNESQIHFQMGLDSG | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 54299482 | 54301150 | - | BLOR01485 | Blo01g01485 | 55925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g01485 | 401 | CDD | bHLH_AtBPE_like | 229 | 314 | - | - | |
Blo01g01485 | 401 | Gene3D | - | 236 | 311 | IPR036638 | GO:0046983 | |
Blo01g01485 | 401 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 142 | 346 | IPR024097 | GO:0006355 | |
Blo01g01485 | 401 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 11 | 150 | IPR024097 | GO:0006355 | |
Blo01g01485 | 401 | MobiDBLite | consensus disorder prediction | 141 | 164 | - | - | |
Blo01g01485 | 401 | MobiDBLite | consensus disorder prediction | 169 | 203 | - | - | |
Blo01g01485 | 401 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 239 | 289 | IPR011598 | GO:0046983 | |
Blo01g01485 | 401 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 237 | 308 | IPR036638 | GO:0046983 | |
Blo01g01485 | 401 | MobiDBLite | consensus disorder prediction | 141 | 227 | - | - | |
Blo01g01485 | 401 | SMART | finulus | 245 | 295 | IPR011598 | GO:0046983 | |
Blo01g01485 | 401 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Blo01g01485 | 401 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 142 | 346 | - | - | |
Blo01g01485 | 401 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 11 | 150 | - | - | |
Blo01g01485 | 401 | Pfam | Helix-loop-helix DNA-binding domain | 242 | 290 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01485 | Blo-Chr1:54299482 | Blo07g00067 | Blo-Chr7:975466 | 5.58E-47 | dispersed | |
Blo01g01485 | Blo-Chr1:54299482 | Blo16g01072 | Blo-Chr16:39276599 | 1.55E-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11924 | PF00010 | HLH | 8.10E-07 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g01485 | - | - | qsu:111985241 | 355.91 |