Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01485 ATGGAAGATTTGGAAGGGCATGATGTGCAATTTCAGCGTAGAAGAGAAGGCATTATGCATTGTTCATCTTCTGAGATGAACACGAACCCAAATCCAATGCCTGAAAAGATTTCAGGAATGTCAATTGGGACAGTTTCTCTGTACAGATCTTCAATGGGAAGCTCTGGGGAGCCTTTCTTCTCTTCTGGTTGGGATTCGTTTGCTAACTTGGGTCAGAGGGAAAATTTTGGATCCTTTATTTCTCATGATGAATTATCCAGTTCTTACCAGCATAACATGTTGGAAAATCCTCACTCGTTTGATTCGACTTATGTCGAGATGGTTCCGAAATTTCCGAGCTTTTCAAGTGGCAATTTCTCAGAAATGGGTAGTTCATTTGTTCTATCTCAACGTCTCCAGATTGTTAATGATGATTGTCCTTCAAATCTTCAAGAAAACAGAGCAGCCGGAGTATCCCCAAATGACAAGAGCAGAAAGCAAGGGCCTGATACCGCTTCATTCAGATCATATGAGAAAGTTGACATGGATTTGGGTAAGGATTCAAATGGAGAAAGTTCTGATGGTTTAAGAGAACAACATCAGAAAAAACCAAAGATTGAAGACAACAATGGCAGGAATTTGCTTAACAAGCCGACCGTAAAACAGGCCAAAGACAACTCTCCCAAGGCAGAAACCTCCAAGGAAAACTACATTCACGTGAGAGCCCGCAGAGGGGAGGCTACAAATAGTCACAGCCTCGCCGAAAGGATAAGGAGAGAAAAGATTAGCGAGCGGATGAAATTGCTTCAAGAACTCGTCCCGGGATGCAACAAGATTACAGGCAAGGCGGTAATGTTGGACGAAATTATCAATTACGTTCAATCACTGCAGCAGCAGGTTGAGTTTCTGTCGATGAAACTTGCCACTGTAAATCCGGAGATTTATACCAATATGGAGGGCATTCTATGGAAAGATATGCTGCACTCTCAGGGCTCCAATGGAGAAATTCTTGGGGTTGGCTCTTCTCAACCGTTCTTCCCTCGAAGAATGTTACCGCCCCAAACTGCCTTTTCTCAGTTTCTTCCTTCGGCTCGAGTGAGTTTAGGACCCTCGAATGAAGCCATGGCCACCTTTCCTTGGCCAGCAACACTAACTGAAGATAAGGTTCAGACAGTTGTCCAAAATGAGTCCCAGATTCATTTTCAAATGGGATTGGATTCGGGTTGA 1206 43.53 MEDLEGHDVQFQRRREGIMHCSSSEMNTNPNPMPEKISGMSIGTVSLYRSSMGSSGEPFFSSGWDSFANLGQRENFGSFISHDELSSSYQHNMLENPHSFDSTYVEMVPKFPSFSSGNFSEMGSSFVLSQRLQIVNDDCPSNLQENRAAGVSPNDKSRKQGPDTASFRSYEKVDMDLGKDSNGESSDGLREQHQKKPKIEDNNGRNLLNKPTVKQAKDNSPKAETSKENYIHVRARRGEATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEIYTNMEGILWKDMLHSQGSNGEILGVGSSQPFFPRRMLPPQTAFSQFLPSARVSLGPSNEAMATFPWPATLTEDKVQTVVQNESQIHFQMGLDSG 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54299482 54301150 - BLOR01485 Blo01g01485 55925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01485 401 CDD bHLH_AtBPE_like 229 314 - -
Blo01g01485 401 Gene3D - 236 311 IPR036638 GO:0046983
Blo01g01485 401 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 142 346 IPR024097 GO:0006355
Blo01g01485 401 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 150 IPR024097 GO:0006355
Blo01g01485 401 MobiDBLite consensus disorder prediction 141 164 - -
Blo01g01485 401 MobiDBLite consensus disorder prediction 169 203 - -
Blo01g01485 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 239 289 IPR011598 GO:0046983
Blo01g01485 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 308 IPR036638 GO:0046983
Blo01g01485 401 MobiDBLite consensus disorder prediction 141 227 - -
Blo01g01485 401 SMART finulus 245 295 IPR011598 GO:0046983
Blo01g01485 401 MobiDBLite consensus disorder prediction 205 219 - -
Blo01g01485 401 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 142 346 - -
Blo01g01485 401 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 150 - -
Blo01g01485 401 Pfam Helix-loop-helix DNA-binding domain 242 290 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01485 Blo-Chr1:54299482 Blo07g00067 Blo-Chr7:975466 5.58E-47 dispersed
Blo01g01485 Blo-Chr1:54299482 Blo16g01072 Blo-Chr16:39276599 1.55E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11924 PF00010 HLH 8.10E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01485 - - qsu:111985241 355.91