Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01486 ATGAAGCCCATTGACGATCTTAAAAATGGTGGCAGTAGTAATAATAGCTGGTTGGGTTTTTCTCTGTCGCCACATATGAAAATGGAGGATAACGCTTCAACGTCTGTCTCGAACTCTTTTCCAACCGGCTGCTACTCTTACCCTCATTTCAACAGCTCGACATTCGGCTATGAGATTGGCGGAAATGGCGGATTTCACTCTCCGTTGACTGTGATGCCCCTTAAGCTAGACGGATCTCTTTCTATTATGGAAGCTCTCACTAGATCACAGCCCGAAGGGATGGTTCTAAATTCCTCGCCCAAGTTGGAGGATTTTCTTGGTGGGGCAAGCTTAGGAACACTTACAAACGATTATGGAAGCCATGGAAAAGAAGCAATCTTTTACAATCAAAGCGATTCAGAAACAGAGAGGGAACTTTCTCTCGATCTTCTTCAACAGCCATACAGGCAGGAAGAGAGCCACATTCCTGTTAATTCCCATCCCTACATTTCTGGAATACCCTGTCACGGTTTATACAATCCGCCATCAGAGGAGGAATCGAAGCTCCATATTTCCAACTGGGAAGTTCGTCAATACTCTGTAAATCAGCCACTGGAGCAGCATTTAACCAACGAGATGATTGATGTTGGAGCTTCTTCCGGCCCTGTTGGTGCGCTGAGCTGCGGGGATTTACAGTCGCTAAGTTTATCAATGAGCCCTGGTTCACAGTCTAGCTGTGTAACCGCCGCTCCTAGCCAGATCTCGCCAACTGGTGTAGAATGTGCGGCCATTGAAACGAAGAAGAGATGCTCTGCGAAGATGGGGCAGAAGCATCCTGTCCACAGGAAGTCCATTGATACTTTTGGGCAAAGAACATCACAGTACAGAGGCGTTACGAGGCATCGATGGACCGGAAGGTATGAAGCTCACTTGTGGGATAATAGTTGCAAGAAGGAAGGTCAAACCAGAAAAGGAAGACAAGGTGGGTACGACATGGAAGAGAAAGCTGCCAGAGCTTACGATCTTGCTGCTCTTAAATACTGGGGACCATCAACGCACATAAACTTTCCACTGGAGAACTATCATACTGAGCTTGAAGAAATGAAGAACATGACCCGGCAGGAATATGTAGCTCACTTGAGAAGAAAAAGTAGTGGGTTTTCCCGTGGAGCTTCGATGTACAGGGGAGTGACGAGGCATCACCAGCATGGAAGATGGCAAGCTCGGATTGGCCGTGTTGCTGGAAACAAAGATCTTTATCTGGGGACATTTAGCACCCAAGAGGAAGCTGCTGAAGCTTACGACATTGCTGCAGTGAAGTTCCGAGGGGTAAATGCGGTCACCAATTTCGACATTTCACGTTATGACGTTGAGAAAATCATAGCCAGCAGTACTCTACTGGCTGGCGAATTTGCTCGACGTAGCAAAGCCATAGATCACAAACCACAAGAGAAGGAAACTGAGGAAATCAATCTCTCTGAAAACACCATGGGCGGCAGCGGGGGAACTCATTGGCGAATTGAATCCGCCAGCAGTAAGAACAACATGATAAACATGGCTAACAGTCTGATGGGGATCGAATCGGTCAACTCAACCGATCCCATAGTGGACGAAACTACCAAGGCTGGGCCGCTTTTTCCTATTCCCTCAACAACGCCTACCACGTTGTGCCGCTCAAGAAACACCAATGCCGACAAAAGCAGCACGGCGATGCTCTTTGCAAAGCCTCCATTGGCATGGCTGCCCCCCGCACAGCTGAGGCCTCCTGTTATTTCCATGGCTCATCTCCCTGTTTTTGCAGCGTGGAATGACACCTAA 1797 47.97 MKPIDDLKNGGSSNNSWLGFSLSPHMKMEDNASTSVSNSFPTGCYSYPHFNSSTFGYEIGGNGGFHSPLTVMPLKLDGSLSIMEALTRSQPEGMVLNSSPKLEDFLGGASLGTLTNDYGSHGKEAIFYNQSDSETERELSLDLLQQPYRQEESHIPVNSHPYISGIPCHGLYNPPSEEESKLHISNWEVRQYSVNQPLEQHLTNEMIDVGASSGPVGALSCGDLQSLSLSMSPGSQSSCVTAAPSQISPTGVECAAIETKKRCSAKMGQKHPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYHTELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAVKFRGVNAVTNFDISRYDVEKIIASSTLLAGEFARRSKAIDHKPQEKETEEINLSENTMGGSGGTHWRIESASSKNNMINMANSLMGIESVNSTDPIVDETTKAGPLFPIPSTTPTTLCRSRNTNADKSSTAMLFAKPPLAWLPPAQLRPPVISMAHLPVFAAWNDT 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54305900 54308498 - BLOR01486 Blo01g01486 55926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01486 598 SUPERFAMILY DNA-binding domain 385 446 IPR016177 GO:0003677
Blo01g01486 598 Pfam AP2 domain 287 342 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 Pfam AP2 domain 387 436 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 Gene3D AP2/ERF domain 286 352 IPR036955 GO:0003700|GO:0006355
Blo01g01486 598 Gene3D AP2/ERF domain 386 446 IPR036955 GO:0003700|GO:0006355
Blo01g01486 598 CDD AP2 385 446 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 SUPERFAMILY DNA-binding domain 286 352 IPR016177 GO:0003677
Blo01g01486 598 ProSiteProfiles AP2/ERF domain profile. 386 444 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 ProSiteProfiles AP2/ERF domain profile. 287 350 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 597 - -
Blo01g01486 598 PRINTS Ethylene responsive element binding protein signature 426 446 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 PRINTS Ethylene responsive element binding protein signature 288 299 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 CDD AP2 286 350 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 SMART rav1_2 386 450 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 SMART rav1_2 287 356 IPR001471 GO:0003700|GO:0006355
Blo01g01486 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01486 Blo-Chr1:54305900 Blo10g00974 Blo-Chr10:28913341 1.88E-120 dispersed
Blo13g01099 Blo-Chr13:33141228 Blo01g01486 Blo-Chr1:54305900 3.07E-38 dispersed
Blo16g00405 Blo-Chr16:14951967 Blo01g01486 Blo-Chr1:54305900 5.22E-09 dispersed
Blo06g00028 Blo-Chr6:526846 Blo01g01486 Blo-Chr1:54305900 2.60E-158 transposed
Blo01g01486 Blo-Chr1:54305900 Blo12g00998 Blo-Chr12:27991434 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11925 PF00847 AP2 4.00E-10 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01486 K09285 - jre:108983297 767.303